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Medicago truncatula (barrel medic) mtr-miR396a-5p URS00001D441B_3880

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mtr-miR396a-5p: mtr-mir396a-5p is a microRNA that has been studied in relation to salt stress and drought stress in plants. In a study, it was found that over-expression of miR396a down-regulated GRF1 and further down-regulated WRKY28, suggesting that the miR396a/GRF1/WRKY28 module enhances tolerance to salt stress by promoting plant growth [PMC9011107]. Another study found that miR396a targeted TGA2.3, indicating that the miR396a/TGA2.3 module enhances salt tolerance by mediating ion homeostasis [PMC9011107]. Additionally, mtr-mir396a-5p was found to be downregulated in response to drought stress [PMC8369265]. In another experiment, the expression of mtr-mir396a-5p was significantly downregulated in comparison to control conditions [PMC8369265]. To validate the expression of miRNA and its target genes, qRT-PCR validation was performed on mtr-mir396a-5p and other selected miRNAs [PMC7016817]. Furthermore, mtr-mir396a-5p was identified as one of the most enriched miRNAs in response to drought stress [PMC7016817]. Overall, these studies highlight the role of mtr-mir396a-5p in enhancing plant tolerance to salt stress and its involvement in response to drought stress.

Genome locations

Gene Ontology annotations

Sequence

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Taxonomic tree

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This sequence is found in 52 other species

  1. Aegilops tauschii ata-miR396c-5p
  2. Amborella trichopoda atr-miR396e
  3. Ananas comosus (pineapple) sbi-miR396c
  4. Aquilegia coerulea (Rocky Mountain columbine) aqc-miR396b
  5. Arabidopsis lyrata (lyrate rockcress) aly-miR396b-5p
  6. Arabidopsis thaliana ath-miR396b-5p
  7. Avicennia marina ama-miR396-5p
  8. Brachypodium distachyon bdi-miR396e-5p
  9. Brassica napus bna-miR396a
  10. Brassica rapa bra-miR396-5p
  11. Bruguiera cylindrica bcy-miR396b
  12. Bruguiera gymnorhiza (Burma mangrove) bgy-miR396b
  13. Camelina sativa (false flax) cas-miR396b
  14. Citrus sinensis (sweet orange) csi-miR396f-5p
  15. Citrus x clementina (clementine) ccl-miR396
  16. Corchorus capsularis (jute) sRNA CCACVL1_27830
  17. Corchorus olitorius aau-miR3
  18. Cucumis melo (muskmelon) cme-miR396d
  19. Cynara cardunculus (wild artichoke) cca-miR396a-5p
  20. Fragaria vesca subsp. vesca fve-miR396b-5p
  21. Glycine max gma-miR396c
  22. Helianthus annuus ath-miR396b-5p
  23. Hypericum perforatum Hyp-miR396
  24. Linum usitatissimum lus-miR396e
  25. Malus domestica (apple) mdm-miR396d
  26. Manihot esculenta mes-miR396f
  27. Nicotiana attenuata microRNA mir-396-like
  28. Nicotiana tabacum (common tobacco) nta-miR396b
  29. Oryza alta miR396c 5p
  30. Oryza australiensis miR396c 5p
  31. Oryza barthii miR396c 5p
  32. Oryza glaberrima miR396c 5p
  33. Oryza minuta miR396c 5p
  34. Oryza nivara miR396c 5p
  35. Oryza rufipogon miR396c 5p
  36. Oryza sativa (Asian cultivated rice) osa-miR396c-5p
  37. Oryza sativa Indica Group miR396c 5p
  38. Oryza sativa Japonica Group (Japanese rice) miR396c 5p
  39. Pachycladon cheesemanii Pch-miR396b
  40. Pachycladon fastigiatum Pfa-miR396b
  41. Picea abies pab-miR396h
  42. Pinus taeda pta-miR396
  43. Populus tomentosa Pto-miR396d
  44. Populus trichocarpa (black cottonwood) ptc-miR396d
  45. Prunus persica (peach) ppe-miR396b
  46. Ricinus communis rco-miR396
  47. Rosa chinensis ath-miR396b-5p
  48. Solanum lycopersicum (tomato) sly-miR396b
  49. Solanum tuberosum stu-miR396-5p
  50. Sorghum bicolor (sorghum) sbi-miR396c
  51. Theobroma cacao tcc-miR396e
  52. Zea mays (maize) zma-miR396f-5p
Publications