Galaxy workflows for RNA-seq analysis

Example Galaxy workflow

Follow Support Protocol 3 in the RNAcentral paper in Current Protocols for Bioinformatics for a step-by-step example showing how to use the Galaxy platform and RNAcentral annotations to perform differential expression analysis of RNA-seq datasets from Drosophila melanogaster.

Galaxy workflow

Single-end and paired-end workflows

In addition, the following Galaxy workflows demonstrate how RNAcentral data can be used for differential expression analysis of RNA-seq datasets.

Single-end RNA-seq workflow

Paired-end RNA-seq workflow

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