Automated summary: This lncRNA sequence is 37,027 nucleotides long and is found in Homo sapiens. Annotated by 9 databases (Ensembl, NONCODE, GeneCards, Ensembl/GENCODE, LncBook, HGNC, RefSeq, MalaCards, LNCipedia). Matches 1 Rfam family (XIST_intron, RF02266). Homo sapiens (human) TSIX transcript, XIST antisense RNA sequence is a product of ENSG00000270641.1, HSALNG0138601, NONHSAG054779.2, TSIX genes. Found in the Homo sapiens reference genome.
According to LncBase, this RNA is targeted by the following miRNAs:
This sequence is found in {{ locations.length }} genome
| Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
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{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
UAAAAAUGUAAAAGAUCAGCUGGGUGUGGUGGCUCACACCUGUAAUCCCAGCACUUUGGGAGGCUGAGGUGGGUGGAUCACGAGAUCAGGAAUUCAAGACCAGCGUGGCCAACAUGGUGAAACCCUGUCUCUACUAAAAAUACAAAAAUUAGCUGAGCAUGAUGGUGCACACUGUAAUCCCAGCUACUCAGCAGGCUGUGGCAGGAGAAUCACUUGAACCCAGGAGGUAGAGGUUGCAGUGAGCCGAGAUCGCGCCAGUGCACUCCAUCCUGGGCAACAGAACAAGACUCCAACUCGAAAAAAAAAUCAAUAAAAAUGUAAAAGAUCAUUCUUAGCUUGGAGGCUAUAAAAAAGGAUGCAGCAUGUCAGAUUUGGCCCAUUAGCUGCAGUUUCCUGACCUCUAUCUACCUCAAUUGGUUCUUUACUUACAUUACAUGGAAAGUGCAAACUUGGAUGGCUUCAAUGUCUGGCUUCUUUUAUUUAUUUAUUUAUUUAUUUAUUUAUUUAUUUAUUUAUUUUUUGAGACGGGGUCUCGCUGUGGCCCGGGCUGGAGUGCAGUGGCACGAUCUCUGCUCACUGCAAGCUCCACCUCCUGGGUUCACACCAUUCUCCUGCCUCAGCCUCCCGAAUAGCUGGAACUACAGGUGCACGCCACCACGCUUGGCUAAUUUUUUAUAUUUUUAGUAGAGACGGGGUUUCACUGUGUUAGUUAGCCAGGAUGGUCUCGAUCUCCUGACCUCAUGAUCCGCCCAUCUCGGCCUCCCAAAGUGCUGGGAUUACAGGUGUGAGCCACCGUGCCCGGCUGGCUGGCUUCUUUUUACCCUUCACAUCUGGCUUUAAAUACUACCUUUUCACAGAUUUCUUCUCUAAUCACUCUUUCUAAAGUAAAUAUGCUGUUUUUCAUUAUUAGUCAUUGCAUCCUAUUUCUUUCCCUUUAAUUUUCUUAUCACAAUGUAUAAUUAUAUGUUUUUUUUUUUUUUUGGUUAUUGCCUGUCUCCCUCAAUAGAUCAUAAGUUCCAUUUGAUAAGGUACAAUGUCUGUUGGUUUAUUAGCCAGUGCCUAACACUACCAUUUAAUAUGUAUUCAAUGAAUAUUUGUUAAAUGUAUUGAUUGAAUUUAAAGUGACUACUCAGCCUACUUCUGCCCCUUGGAGCUUGGAUUGUUUCUUCAAAGGUAUUGAUCCUUUUGACUAUUUUAAUUAUGAAUUCACUAAAGACAUCUGGAAGGCUUAUUGUGUCAAGCAGUGCCAAAUCCAUGGCUUGAUGAACCUAGAUCCAUCCCCUUCCCCUUUCCAUAUCACAGAUGACAACUUGAUGGUUGGCCUAUGACUUGUAAAAGUUGUCAUAUUUGAAUUCUGAAAUUUCUCUAAUUUUCUUGGGAAGCAGAAAGGAAAAAUUAGUAGUUGGCCUCAAAGGGACAGUUGAAUUUCACAUAUAAUGAGCAAAGUAGUGUGAGGAAGAGAGGAGGGCCUUUUCUUUUGAGGUCAUAACUAAAAGUUAGGUGAGCAAAUGCCAUAAGCAUGAAAAUAGCAAACCAAGCUUCUUGGUUUCUAUCCAAAGGCUUUGUUGGGAAAAGUAUCAAAGUGUGUUCAUUUGUUAUGUAAUAUAUAAGGUAGAGAACCCAAUUUGAAGGAGGUGGAAUAACUUUCCAAAAUACUUAUGGCUAAAUUCUCAGUUGAUCUUGGAAUAAGAUUCAAGAAUCCAAAUGCACCCUUCUUUGUUAUCUUGCUAGAAAACAUGCUGGGCAUGGUGGCUCAUGCCUGUAAUCCCAACACGUUGAGAGGCCGAGGUGGGCAGAUCACGAGAUCAGGAGUUGGAGACCAGCCUGAUCAACAUGGUGAAGCCCCGUCUCUACUAAAAAUACAAAAAUUAGCCAGACAUAGUGGCACGCACCUAUAAUCCGUGCUACUCAGGAGGUAGGCAGGAGAAUUGCUGGAACCCGGGAGGUGGAGUUUGCAGUGAGCCAAGAUCACACCACUGCAAUCCAGCCUGGGUGACAGAGCGAGACUCUGUCUCAAAAAAAAAAGAAAAGAAAAAAGAAAAGAAAGAAAAAAGGGAAGGGAAGGAAAGGGGGGAGGGGAGGGAAGGGAAGGGAAGGGAAGGUAAGGGAAGGGAAGGGAAGGGAAGGGAAAAGGGAAAACAAUGUGCUUUUACCCACAGCUGAUAAGCUUUUCUAAUUGUCUACCUUUGGGUUAAACUUUAUCAUUGAGUGUUUUUAUCCCAUUAUGAAAGAAUUAAGGUUUGAAGGACUGAGGUAAGGGUGGAUAUUUACUCUUAAUUGAGUAGCUUAACCAAGUCAAGCCACAGAUUAGCUGAAGCCAAAAAGCACUGGCAGCAUUUGAAAUAACUGAGAACAUAUUAUACUUAACACUUUAUUAUCUAAGAGAGGCACUUGAAGUUGAGACCUAGAAAUUUGAUUCUGGGUUCUUUGUUUCUAAGGGGCAGGGUGAACCCAGCUAUAGCAUUCACAGAUGCUAUAGAAUUAUAUAUAUUCUAUAUAUAAUUAUAUAUAUUACAUUCAUAUUAAUAUAUGUUAAUAUAUUCUAUAUUAUUCAUAUAGAAUUCACAGAUAAUCCAAGUGCUUUUUUAAUACAUUGAUACCAAAUCUCUCCUGCUCUCAAAAAAAAAAGCCCAAGGCAAAAAUUUUUGAUUAGCCUGUAUCCGCAAAUUCAUAGUGCAUGGCAUGAUGGGUACUCUACAUCCCUCCUCCUAUUGCACUCACUGUGCCCAGAUGAACCUAAAGUCACCAGUAAUAGUGCUAAUGUAGUAAUGGGCCCAAGCUUCAAAAGAAGGAAAAUUAGUAUUCAGUAUUUAAAUGUGGGAAAGAGGAAGAAUAUGGAAAUUAUCAAUUUUAUAAUACCUAUACAUAUUCUUACCUGCAUUAAUGUGAAUAGACAUCAAUGAUAAACAGAAUAAUGCCCCAUAAAGAUGUCUACACUGUAAUCUCCAAAACUUAUAACUAUACUAUAUCACAUGGCAAGAGGGAAUUAAGGUUACUAAUCAGCUGACCUUGAGAUGGGAGAUUCUCCUGGUUUGUAUGGGUGGGCCCAAUGUAAUCACAGGGUCCUUAUAAAUGGAAAAGGCAGACAGGAGAUUCAGUGUCAGACUGAUACAAUGAGGGAAAGACUACCAGCAGUUGAUGGCUUUGAAGAUAGAAGAAGGGGGCCAUGAGCCAAGAAAUGUGAGUAGCCUCUAGAAGCUGAAAAAGGCAAGAAAACGGAUUCUUCCCUAGAAUCUCCAGAAAUGCAGCCCUGCCAACAUGGUGAUUUUAACUCAAUGAGAUGCAUUUUAGACUUCUGACAUCUAGAAUUGUGUUAUUUUCAGCCCUCAAGUUUGUGGUAAUUUGUUACAGCAGCAUUAAGAAAAUGUACAAUGACCAUGUGCAGUGCCUCAUGCUUGUAAUCCCAGCACUUUGGGAGGCCAAGGUGGGUGGAUCGCUUGAGUCCAAGAGUUCGAGACCAGCCUGGGAAACAUGGUGAAACCUUGUCUCUACAAAAACACAAAAAUUAGCCUGGUGUGGUUGUGUGGACCUGUAGUCCCAGCUACUCUGGAGGCUGAGGUGGGAGGAUGGCUUAAACCCAUAAGGUGGAGAUUACAAUGAGCCAAGAUCAUGCCACUGCACUCCAGCCUGGACAGUAGAGCCAGAACUUCUCUCAAAAAAAUAAAAAAGAAAGAAACUAUACAAUGCUCCUGUGAUUCUAGUGCUAUGUACAUAUAUCCUUUAUAGGGAAUUAAGGAGGUUAUAGACACAACCAGAAGAGGAGGCAUGGAAUAGACUAAUGUAUAAUGGAUAGGAAAGUGUAUCUUUUACAACUUCUCUGUAAAAACACCUUCACCUACUUUAUGAGUUUGCCUCAGCUGCCAUAACAAAAUAUCAGACCAAGUGGCUUAAAUAACAAUUUAUUUUCUCACAGUUCUGGAGGCUAGAAGUCUAAGAUGAAAGUGCCAGCAAGUUUGAUUUCUGGUGAAGUCUCUCUUCCUUGCUUGCCAAUGGCCGCUUUCUCACUGUGUCUUCAAAUGUCCUUCCUCUGAGUAUGUGAGGAGAGAGAGGUUUGAUGCCUCUUCACCUUCUUAUAAGGACACCAGUCCUACUGGAUUAGGGCUCCACCCUUAUGACCUCAUUUAACCUUAAUUACCUCCUUAAAGGUUCUAUCUCCAAAUACAGUCACAUUUGGAGUCAGACCUACAACAUAUGAAUUUUGAGAGGACACAAUUCAGUCUAUAACACCUAGAUGGAAGGCAAUUUCAUAUAAAGAUGAUAUGCAGUCUAUGACAGCAAAGUAGCUAGUGGAAAUCACAACCCCUAAUUCUAUUUUUAUGUCAUUCCCUAAGUCCAGGUCCCAUGUGGAUAUAGCAUUGUUCAGGGCUAUCUCUUUGCUGUUCUUUUUUUUUUUUUAGACUCACACAAGCAAUGUGGAGAAGGAACAUGAAAACAUCUUUGAGAUAGAGCUUAAUACAGAUGUCAAUCUCUUUGUAAAUAAGCAAUUAAAAGUGGAACCACUGUCCACCAUGUGAGAAGAGUGACUGGCUAUGGCUGGAUAUUUUUAAAUACACAUAAAAUGUGGUAUAAAUGGUAGAAUGCCAGGGAUAGAAGGAGUAUCUUAUAAGUUACCUAGUCAACGUUCUGGCUUCUGGGCAGAAAACUAUCUAAACUCAGCCAGAUAAUCAGUUUCAACUAAAUCAGGAAAACAUGGAAUCAUCUUUAUCUAGGUAGUGUUAUAGUUACAUUGCCUCAUUUAUCUACACAUCAAUAAAUUCUUUCUCAUUGCUAAUAUUUAUCAUUCUUAUCAUAGUAUAAGCAAAUGUUUUAAUUCUAUUAUGGUAAAGAUAAAGCUUCUGUAAUUAAAACACUUUAAUCUGGAAAGACAGCAGUAAACCCUUCAAGCAAAAGCCCAAGUAGGUUCAAAAAUAAUAGCCAGAGAGGUUAAAGGUAAACCAAUAGAGUGAUAUGUUACAGCAACUAAGGGAGAGAGGCAGGAGUUUUUUAAAAGAGAGAAGAGG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