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Sus scrofa (pig) ssc-miR-183 URS0000394886_9823

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ssc-mir-183: Ssc-mir-183 is a microRNA that has been detected in early-stage colorectal neoplasia in APC1311 pigs [PMC5707088]. It is one of the ten differentially expressed miRNAs that have been validated by qRT-PCR in this study [PMC5707088]. In more advanced HG-IEN samples, the levels of ssc-mir-183 were significantly elevated compared to LG-IEN samples [PMC5707088]. Similarly, elevated levels of mir-183 have been associated with human colorectal carcinogenesis [PMC5707088]. Ssc-mir-183 has also been found to be upregulated at 1W compared with BW in a study involving pigs [PMC8367414]. Additionally, ssc-mir-183 has higher expression levels in mpiPSCs compared to hpiPSCs [PMC4934789]. In the lungs of Landraces' pigs, ssc-mir-183 was consistently upregulated at 3 dpi, 5 dpi, and 7 dpi [PMC5381705]. In Tongcheng pigs' lungs, ssc-mir-183 was one of the most upregulated microRNAs at different time points after infection with a specific pathogen [PMC5381705]. Ssc-mir-183 is one of the four differentially expressed miRNAs detected in this study that have been reported previously [PMC7222822]. It is also one of the six common miRNAs found among three pairs in another study involving pigs and E. coli infection susceptibility [PMC7222822]. Ssc-mir-183 is regulated by three different transcription factors along with five other miRNAs that are upregulated in E. coli F18-susceptible pigs [PMC3427155].

Genome locations

Gene Ontology annotations

Sequence

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UAUGGCACUGGUAGAAUUCACUG

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This sequence is found in 33 other species

  1. Bos taurus bta-miR-183
  2. Cervus elaphus (red deer) Cel-miR-183
  3. Ciona intestinalis cin-miR-183-5p
  4. Columba livia (rock pigeon) cli-miR-183-5p
  5. Cyprinus carpio ccr-miR-183
  6. Danio rerio dre-miR-183-5p
  7. Eptatretus burgeri Ebu-Mir-96-P3f_5p (mature (guide))
  8. Gallus gallus gga-miR-183
  9. Gekko japonicus Gja-Mir-96-P3-v1_5p (mature (guide))
  10. Gorilla gorilla gorilla ggo-miR-183 (MIR183)
  11. Gorilla gorilla (western gorilla) ggo-miR-183
  12. Haplochromis burtoni (Burton's mouthbrooder) abu-miR-183
  13. Macaca mulatta mml-miR-183-5p
  14. Macaca nemestrina (pig-tailed macaque) mne-miR-183
  15. Maylandia zebra (zebra mbuna) mze-miR-183
  16. Microcaecilia unicolor Mun-Mir-96-P3-v1_5p (mature (guide))
  17. Monodelphis domestica mdo-miR-183-5p
  18. Mus musculus Mus_musculus piRNA piR-mmu-8206866
  19. Neolamprologus brichardi (lyretail cichlid) nbr-miR-183
  20. Ophiophagus hannah oha-miR-183-5p
  21. Oreochromis niloticus oni-miR-183
  22. Pan paniscus (pygmy chimpanzee) ppa-miR-183
  23. Pan troglodytes (chimpanzee) ptr-miR-183
  24. Petromyzon marinus pma-miR-183-5p
  25. Pundamilia nyererei pny-miR-183
  26. Python bivittatus (Burmese python) pbv-miR-183-5p
  27. Saguinus labiatus sla-miR-183
  28. Sphenodon punctatus (tuatara) Spt-Mir-96-P3_5p (mature (guide))
  29. Takifugu rubripes (torafugu) fru-miR-183
  30. Tetraodon nigroviridis tni-miR-183
  31. Tor tambroides miR-183-5p
  32. Xenopus laevis xla-miR-183-5p
  33. Xenopus tropicalis xtr-miR-183
Publications