Caution, this is an AI generated summary based on literature. This may have errors, see here for more.
Please share your feedback with us.
osa-miR396a-5p: Osa-mir396a-5p is a specific type of small RNA molecule that is mainly expressed in panicles [PMC6167770]. It has been identified as a differential molecule with differential regulations or networks in tillers [PMC5981461]. In a study, it was found that the lncRNA MSTRG.52515.5 acts as an eTM (endogenous target mimic) that interferes with the interaction between osa-mir396a-5p and its target genes OsGRF10 and OsGRF6 [PMC7840536]. Another study identified MSTRG.52515.5 as a potential eTM for osa-mir396a-5p in ceRNA networks prediction [PMC7840536]. It was also observed that osa-mir396a-5p has a similar mature sequence to osamiR821a, osamiR821b, and osamiR821c, but they have different stem loop sequences [PMC3819571]. In the same study, it was predicted that osa-mir396a-5p is one of the submergence-responsive miRNAs expressed during submergence [PMC3819571]. Additionally, during coleoptile senescence, osa-mir396a-5p was highly upregulated (>4-fold) along with other conserved miRNAs such as osamiR160e-5p and osamiR531a [PMC9597502].
In summary, osa-mir396a-5p is an important small RNA molecule expressed in panicles and involved in various regulatory networks. It has been found to have differential regulations and interactions with target genes. Additionally, it plays a role in submergence response and senescence processes.
Genome locations
Gene Ontology annotations
Ancestor Chart
Loading ontology ancestors...
Failed to load QuickGO Ancestor chart
Sequence
Sequence features are shown above as colored rectangles.
Zoom in and click to view details, or
Reset