Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Mus musculus (house mouse) mmu-miR-335-5p URS0000237AF9_10090

Automated summary: This miRNA sequence is 23 nucleotides long and is found in Mus musculus. Annotated by 6 databases (PirBase, RefSeq, miRBase, TarBase, LncBase, ENA). Described in 28 papers. Mus musculus (house mouse) mmu-miR-335-5p sequence is a product of mmu-miR-335-5p, Mir335, mmu-miR-335, miR-335, miR-335-5p genes. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 0610007L03Rik, 0610009K11Rik, 0610011H20Rik, 0610011N22Rik, 0610020I02Rik, 0610035N01Rik, 0610038M03Rik, 0610043A03Rik, 0710001K01Rik, 0710001O03Rik.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    UCAAGAGCAAUAACGAAAAAUGU

    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    This sequence is found in 11 other species

    1. Bos taurus (cattle) bta-miR-335
    2. Canis lupus familiaris cfa-miR-335
    3. Capra hircus (goat) miR-335
    4. Cervus elaphus (red deer) cel-miR-335
    5. Eptesicus fuscus (big brown bat) efu-miR-335
    6. Equus caballus (horse) eca-miR-335
    7. Homo sapiens hsa-miR-335-5p
    8. Macaca mulatta (Rhesus monkey) mml-miR-335-5p
    9. Ovis aries miscellaneous RNA
    10. Pan troglodytes (chimpanzee) ptr-miR-335
    11. Pongo pygmaeus ppy-miR-335
    12. Rattus norvegicus (Norway rat) rno-miR-335