Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Arabidopsis thaliana (thale cress) ath-miR167b URS000013A25F_3702

Caution, this is an AI generated summary based on literature. This may have errors, see here for more. Please share your feedback with us.

ath-miR167a-5p: Ath-mir167a-5p is a precursor of a miRNA that is overexpressed in apomictic samples [PMC6567921]. Another member of the miR167 family, ccl-miR167a, showed a modest increase in expression [PMC6567921]. Ath-mir167a-5p targets five different DElncRNAs, while the lncRNA TCONS_00001191 is targeted by two miRNAs, ath-miR164a and ath-miR164c-5p [PMC9971629]. Ath-mir167a-5p, along with other miRNAs such as ath-miR167b and ath-miR5665, targets genes such as ARF6, ARF8, ARF5, ARF2, and ARF3 [PMC8151434]. Fifteen miRNAs related to seed germination were selected to validate their expression using qRT-PCR [PMC8151434]. The target genes of these 15 miRNAs were found to be related to plant hormones based on KEGG and GO analysis [PMC8151434]. The expression of ath-mir167a-5p and other miRNAs was found to be down-regulated in eno2-, while the expression of other miRNAs was up-regulated [PMC8151434]. MIR167a (ath-mir167a-5p precursor) was identified as the major functional precursor for MIR167 in vivo with a strong regulatory effect on ARF8 [PMC7769420]. Ath-mir167a-5p was identified as the main regulator of ARF8 based on reverse searching using "Reverse Digger" tool [PMC7769420].

Genome locations

Gene Ontology annotations


Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

Search for similar sequences

Taxonomic tree

View annotations in different species by clicking on species names.

Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

This sequence is found in 35 other species

  1. Aegilops tauschii ata-miR167a-5p
  2. Ananas comosus (pineapple) microRNA 167g
  3. Arabidopsis lyrata (lyrate rockcress) aly-miR167a-5p
  4. Asparagus officinalis (garden asparagus) aof-miR167a
  5. Brachypodium distachyon bdi-miR167a
  6. Brassica napus (rape) bna-miR167c
  7. Brassica rapa bra-miR167d
  8. Carica papaya cpa-miR167b
  9. Citrus sinensis csi-miR167e-5p
  10. Corchorus capsularis (jute) sRNA CCACVL1_14458
  11. Corchorus olitorius ahy-miR167-
  12. Cucumis melo cme-miR167b
  13. Cynara cardunculus var. scolymus cca-miR167c
  14. Digitalis purpurea (common foxglove) dpr-miR167b
  15. Glycine max (soybean) gma-miR167b
  16. Gossypium hirsutum (cotton) ghr-miR167a
  17. Helianthus annuus (common sunflower) ath-miR167a-5p
  18. Linum usitatissimum lus-miR167e
  19. Malus domestica mdm-miR167b
  20. Manihot esculenta (cassava) mes-miR167c
  21. Medicago truncatula (barrel medic) mtr-miR167a
  22. Nicotiana tabacum (common tobacco) nta-miR167d
  23. Oryza sativa (Asian cultivated rice) osa-miR167b
  24. Oryza sativa Japonica Group (Japanese rice) microRNA osa-miR167b
  25. Populus tomentosa Pto-miR167d
  26. Populus trichocarpa ptc-miR167a
  27. Prunus persica (peach) ppe-miR167a
  28. Ricinus communis (castor bean) rco-miR167b
  29. Solanum lycopersicum sly-miR167a
  30. Solanum tuberosum (potato) stu-miR167a-5p
  31. Sorghum bicolor (sorghum) sbi-miR167a
  32. Theobroma cacao tcc-miR167a
  33. Triticum aestivum (bread wheat) tae-miR167a
  34. Vitis vinifera vvi-miR167b
  35. Zea mays (maize) zma-miR167c-5p