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Sus scrofa (pig) ssc-miR-19a URS000006FDD4_9823

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ssc-mir-19a: Ssc-mir-19a is a pig-encoded DE miRNA that has been shown to target pre-miRNA ssc-mir-21 [PMC7329775]. It is differentially expressed and plays a role in the urea cycle [PMC5043173]. Ssc-mir-19a has been found to target TNFα, IL-12α, IL-20, and other genes involved in immune response [PMC4778948]. It is one of the five overlapping DEmiRNAs used for gene ontology and pathway analyses in the DAVID software to understand miRNA regulatory function in different pig breeds [PMC4536519]. Ssc-mir-19a has also been found to target HSPA1A and is expressed in castrated male pigs [PMC3490867] [PMC3901342]. It has been shown to regulate PRRSV infection by targeting key receptors or directly targeting the virus genome [PMC10000162]. Its expression has been found to increase in response to treatment in a qRT-PCR study [PMC10000162]. Additionally, ssc-mir-19a has been predicted to target NRF2 and GCLC genes involved in oxidative stress response and glutathione synthesis, respectively [PMC7426424].

Genome locations

Gene Ontology annotations

Sequence

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UGUGCAAAUCUAUGCAAAACUGA

Taxonomic tree

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This sequence is found in 52 other species

  1. Alligator mississippiensis (American alligator) Ami-Mir-19-P1a_3p (mature (guide))
  2. Anolis carolinensis Aca-Mir-19-P1a_3p (mature (guide))
  3. Ateles geoffroyi (black-handed spider monkey) age-miR-19a
  4. Bos taurus bta-miR-19a
  5. Callithrix jacchus cja-miR-19a
  6. Callorhinchus milii Cmi-Mir-19-P1a-v1_3p (mature (guide))
  7. Canis lupus familiaris cfa-miR-19a
  8. Capra hircus chi-miR-19a
  9. Cavia porcellus (domestic guinea pig) cpo-miR-19a-3p
  10. Cervus elaphus cel-miR-19a
  11. Chrysemys picta bellii (western painted turtle) Cpi-Mir-19-P1a_3p (mature (guide))
  12. Columba livia cli-miR-19a-3p
  13. Cricetulus griseus (Chinese hamster) cgr-miR-19a
  14. Danio rerio dre-miR-19a-3p
  15. Dasypus novemcinctus dno-miR-19a-3p
  16. Echinops telfairi (small Madagascar hedgehog) Ete-Mir-19-P1a_3p (mature (guide))
  17. Equus caballus (horse) eca-miR-19a
  18. Gadus morhua (Atlantic cod) gmo-miR-19a-3p
  19. Gallus gallus (chicken) gga-miR-19a-3p
  20. Gekko japonicus Gja-Mir-19-P1a_3p (mature (guide))
  21. Gorilla gorilla gorilla ggo-miR-19a (MIR19A)
  22. Gorilla gorilla ggo-miR-19a
  23. Homo sapiens (human) hsa-miR-19a-3p
  24. Lagothrix lagotricha (brown woolly monkey) lla-miR-19a
  25. Latimeria chalumnae Lch-Mir-19-P1a_3p (mature (guide))
  26. Lemur catta (Ring-tailed lemur) lca-miR-19a
  27. Macaca mulatta mml-miR-19a-3p
  28. Macaca nemestrina (pig-tailed macaque) mne-miR-19a
  29. Microcaecilia unicolor Mun-Mir-19-P1a_3p (mature (guide))
  30. Monodelphis domestica (gray short-tailed opossum) mdo-miR-19a-3p
  31. Monopterus albus Mal-Mir-19-P1a2_3p (mature (guide))
  32. Mus musculus (house mouse) mmu-miR-19a-3p
  33. Nomascus leucogenys (northern white-cheeked gibbon) nle-miR-19a
  34. Ophiophagus hannah oha-miR-19a-3p
  35. Ornithorhynchus anatinus oan-miR-19a-3p
  36. Oryctolagus cuniculus (rabbit) ocu-miR-19a-3p
  37. Ovis aries (sheep) miscellaneous RNA
  38. Pan paniscus (pygmy chimpanzee) ppa-miR-19a
  39. Pan troglodytes (chimpanzee) ptr-miR-19a
  40. Pongo pygmaeus (Bornean orangutan) ppy-miR-19a
  41. Python bivittatus pbv-miR-19a-3p
  42. Rattus norvegicus (Norway rat) rno-miR-19a-3p
  43. Saguinus labiatus (red-chested mustached tamarin) sla-miR-19a
  44. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-19-P1a_3p (mature (guide))
  45. Scyliorhinus torazame Sto-Mir-19-P1a-v1_3p (mature (guide))
  46. Sphenodon punctatus (tuatara) Spt-Mir-19-P1a_3p (mature (guide))
  47. Takifugu rubripes (torafugu) fru-miR-19a
  48. Tetraodon nigroviridis tni-miR-19a
  49. Tor tambroides miR-19a-3p
  50. Tupaia chinensis tch-miR-19a-3p
  51. Xenopus laevis (African clawed frog) Xla-Mir-19-P1a4_3p (mature (co-guide))
  52. Xenopus tropicalis xtr-miR-19a
Publications