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Sus scrofa (pig) ssc-miR-196a URS00000DA6A7_9823

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ssc-miR-196a: Ssc-mir-196a is a microRNA that has been identified as one of the differentially expressed miRNAs in various studies. In one study, it was found to be up-regulated along with other miRNAs such as ssc-miR-582-5p, ssc-miR-150, ssc-miR-155-5p, and ssc-miR-331-5p [PMC9778086]. Another study showed that ssc-mir-196a and ssc-miR-451 exhibited a pattern of increased expression at 1W and decreased expression at 2W in piglet development [PMC8367414]. Ssc-mir-196a was further investigated in the same study as it represented pattern 1 among the differentially expressed miRNAs [PMC8367414]. Additionally, it was found to be a shared node in both lncRNA–miRNA–mRNA co-regulatory networks and circRNA–miRNA–mRNA co-regulatory networks [PMC9603960]. Ssc-mir-196a has also been reported to be related to lipid metabolism along with other miRNAs such as ssc-miR-141, ssc-miR192, and sscmiR486 [PMC9603960]. In another study on colorectal neoplasia, elevated expression of sscmir196a was observed in more advanced samples compared to early-stage samples [PMC5707088]. The higher expression of mir196a has also been associated with cell growth promotion, migration, and invasion of colorectal cancer cells [PMC5707088]. These findings highlight the importance of mir196a in various biological processes.

Genome locations

Gene Ontology annotations

Sequence

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UAGGUAGUUUCAUGUUGUUGGG

Taxonomic tree

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This sequence is found in 108 other species

  1. Alligator mississippiensis Ami-Mir-196-P3_5p (mature (guide))
  2. Anolis carolinensis (green anole) Aca-Mir-196-P1_5p (mature (guide))
  3. Ateles geoffroyi (black-handed spider monkey) age-miR-196
  4. Bos taurus bta-miR-196a
  5. Callorhinchus milii Cmi-Mir-196-P4_5p (mature (guide))
  6. Canis lupus familiaris (dog) cfa-miR-196a
  7. Cavia porcellus (domestic guinea pig) cpo-miR-196a-5p
  8. Chiloscyllium plagiosum microRNA cpl-miR-196a
  9. Chrysemys picta bellii Cpi-Mir-196-P3_5p (mature (guide))
  10. Chrysemys picta cpi-miR-196-5p
  11. Columba livia (rock pigeon) cli-miR-196-5p
  12. Cricetulus griseus (Chinese hamster) cgr-miR-196a-5p
  13. Cyprinus carpio (common carp) ccr-miR-196a
  14. Danio rerio (zebrafish) dre-miR-196a-5p
  15. Daubentonia madagascariensis (aye-aye) dma-miR-196
  16. Eptatretus burgeri (inshore hagfish) Ebu-Mir-196-P5_5p (mature (guide))
  17. Equus caballus eca-miR-196a
  18. Gadus morhua (Atlantic cod) gmo-miR-196a-5p
  19. Gallus gallus Gga-Mir-196-P3_5p (mature (guide))
  20. Gekko japonicus Gja-Mir-196-P1_5p (mature (guide))
  21. Gorilla gorilla (western gorilla) microRNA mir-196-2
  22. Haplochromis burtoni abu-miR-196a
  23. Homo sapiens (human) hsa-miR-196a-5p
  24. Lagothrix lagotricha lla-miR-196
  25. Latimeria chalumnae (coelacanth) Lch-Mir-196-P3_5p (mature (guide))
  26. Lepisosteus oculatus Loc-Mir-196-P3_5p (mature (guide))
  27. Lethenteron camtschaticum (Arctic lamprey) miR-196
  28. Macaca mulatta (Rhesus monkey) Mml-Mir-196-P3_5p (mature (guide))
  29. Maylandia zebra (zebra mbuna) mze-miR-196a
  30. Microcaecilia unicolor Mun-Mir-196-P1_5p (mature (guide))
  31. Monopterus albus (swamp eel) Mal-Mir-196-P4a_5p (mature (guide))
  32. Mus musculus mmu-miR-196a-5p
  33. Neolamprologus brichardi nbr-miR-196a
  34. Ophiophagus hannah (king cobra) oha-miR-196b-5p
  35. Oreochromis niloticus (Nile tilapia) oni-miR-196a
  36. Ornithorhynchus anatinus (platypus) oan-miR-196a-5p
  37. Oryctolagus cuniculus (rabbit) ocu-miR-196a-5p
  38. Otolemur garnettii oga-miR-196a
  39. Pan paniscus ppa-miR-196
  40. Pan troglodytes ptr-miR-196a
  41. Papio hamadryas (hamadryas baboon) pha-miR-196a
  42. Petromyzon marinus (sea lamprey) pma-miR-196a-5p
  43. Pongo pygmaeus ppy-miR-196-2
  44. Pundamilia nyererei pny-miR-196a
  45. Rattus norvegicus rno-miR-196a-5p
  46. Salmo salar ssa-miR-196a-5p
  47. Scyliorhinus torazame (cloudy catshark) Sto-Mir-196-P3_5p (mature (guide))
  48. Sphenodon punctatus (tuatara) Spt-Mir-196-P1_5p (mature (guide))
  49. Taeniopygia guttata Tgu-Mir-196-P1_5p (mature (guide))
  50. Takifugu rubripes (torafugu) fru-miR-196a
  51. Tetraodon nigroviridis (spotted green pufferfish) tni-miR-196a
  52. Tor tambroides (Thai mahseer) miR-196a-5p
  53. Xenopus laevis (African clawed frog) Xla-Mir-196-P4c-v1_5p (mature (guide))
  54. Xenopus tropicalis (tropical clawed frog) Xtr-Mir-196-P4_5p (mature (guide))
Publications