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Sus scrofa (pig) ssc-miR-181b URS0000574E81_9823

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ssc-miR-181b: Ssc-mir-181b is a differentially expressed (DE) miRNA that was evaluated in a study [PMC7531090]. It was one of three DE miRNAs, along with ssc-mir-423-5p and ssc-mir-196b-5p, that were analyzed in the study [PMC7531090]. Additionally, ssc-mir-181b was one of eight DE miRNAs selected from a larger group of 45 miRNAs [PMC7531090]. The study also investigated the target sequences of ssc-mir-181b and other miRNAs using the pMIR-REPORT Luciferase vector [PMC5776175]. The expression levels of ssc-mir-181b were measured using qRT-PCR on the StepOnePlus RT-PCR System [PMC7383124]. Interestingly, another study found low and unchanged expression levels of ssc-mir-181b in colorectal cancer (CRC) development in humans [PMC5707088]. Although these differences did not reach statistical significance, they were consistent with data from small RNA sequencing [PMC5707088]. Finally, qRT-PCR validation confirmed the differential expression of ssc-mir-181b along with other miRNAs including ssc-miR-155-5p and ssc-miR191 in CRC development [PMC5707088]. References: [PMC7531090] - This reference is for the evaluation and selection of DE miRNAs. [PMC5776175] - This reference is for the investigation of target sequences using pMIRREPORT Luciferase vector. [PMC7383124] - This reference is for measuring expression levels using qRTPCR on StepOnePlus RTPCR System. [PMC5707088] - This reference is for low and unchanged expression levels in CRC development.

Genome locations

Gene Ontology annotations

Sequence

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AACAUUCAUUGCUGUCGGUGGGUU

Taxonomic tree

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This sequence is found in 45 other species

  1. Alligator mississippiensis (American alligator) ami-miR-181b-5p
  2. Anolis carolinensis (green anole) Aca-Mir-181-P2b_5p (mature (guide))
  3. Bos taurus bta-miR-181b
  4. Callithrix jacchus (white-tufted-ear marmoset) Callithrix_jacchus piRNA piR-cja-484596
  5. Callorhinchus milii Cmi-Mir-181-P2b_5p (mature (guide))
  6. Canis lupus familiaris Cfa-Mir-181-P2b_5p (mature (guide))
  7. Cavia porcellus cpo-miR-181b-5p
  8. Chrysemys picta bellii Cpi-Mir-181-P2b_5p (mature (guide))
  9. Chrysemys picta cpi-miR-181b-5p
  10. Columba livia cli-miR-181b-5p
  11. Danio rerio (zebrafish) Dre-Mir-181-P2c1_5p (mature (guide))
  12. Dasypus novemcinctus dno-miR-181b-5p
  13. Drosophila erecta Drosophila_erecta piRNA piR-der-12904
  14. Drosophila melanogaster (fruit fly) Drosophila_melanogaster piRNA piR-dme-21035062
  15. Echinops telfairi Ete-Mir-181-P2b_5p (mature (guide))
  16. Gadus morhua gmo-miR-181b-5p
  17. Gallus gallus Gga-Mir-181-P2b_5p (mature (guide))
  18. Gekko japonicus Gja-Mir-181-P2b_5p (mature (guide))
  19. Gorilla gorilla gorilla ggo-miR-181b (MIR181B)
  20. Gorilla gorilla (western gorilla) ggo-miR-181b
  21. Hippoglossus hippoglossus hhi-miR-181b
  22. Homo sapiens Hsa-Mir-181-P2b_5p (mature (guide))
  23. Lagothrix lagotricha lla-miR-181b
  24. Latimeria chalumnae (coelacanth) Lch-Mir-181-P2b_5p (mature (guide))
  25. Lepisosteus oculatus Loc-Mir-181-P2b_5p (mature (guide))
  26. Macaca mulatta (Rhesus monkey) mml-miR-181b-5p
  27. Macaca nemestrina mne-miR-181b
  28. Monodelphis domestica (gray short-tailed opossum) Mdo-Mir-181-P2b_5p (mature (guide))
  29. Monopterus albus (swamp eel) Mal-Mir-181-P2b2_5p (mature (guide))
  30. Mus musculus (house mouse) mmu-miR-181b-5p
  31. Ornithorhynchus anatinus Oan-Mir-181-P2a_5p (mature (guide))
  32. Oryctolagus cuniculus (rabbit) ocu-miR-181b-5p
  33. Oryzias latipes (Japanese medaka) ola-miR-181b-5p
  34. Pan paniscus (pygmy chimpanzee) ppa-miR-181b
  35. Pan troglodytes microRNA mir-181b-1
  36. Pongo pygmaeus (Bornean orangutan) microRNA mir-181b-1
  37. Pteropus alecto pal-miR-181b-5p
  38. Python bivittatus Pbv-Mir-181-P2b_5p (mature (guide))
  39. Rattus norvegicus (Norway rat) Rno-Mir-181-P2b_5p (mature (guide))
  40. Sarcophilus harrisii Sha-Mir-181-P2a_5p (mature (guide))
  41. Scyliorhinus torazame (cloudy catshark) Sto-Mir-181-P2b_5p (mature (guide))
  42. Sphenodon punctatus Spt-Mir-181-P2c3_5p (mature (guide))
  43. Taeniopygia guttata (zebra finch) tgu-miR-181b-5p
  44. Xenopus laevis (African clawed frog) Xla-Mir-181-P2b3_5p (mature (guide))
  45. Xenopus tropicalis Xtr-Mir-181-P2b_5p (mature (guide))
Publications