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Sus scrofa (pig) ssc-miR-129b URS00004E1410_9823

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ssc-mir-129b: ssc-mir-129b, a microRNA, was among the four miRNAs validated by qRT-PCR to assess expression differences in RNA-Seq studies [PMC8834144]. It was identified as one of the most affected RNAs in a network analysis involving miRNA and mRNA interactions [PMC8861501]. Although ssc-mir-129b showed better trends in expression upon ZEN exposure, it was one of the microRNAs down-regulated, suggesting a potential role in the response to this mycotoxin [PMC6598998], [PMC6722729]. However, its low expression levels indicated a minimal impact on immunity or inflammation in porcine peripheral blood mononuclear cells (PBMCs) [PMC7903524]. Upon lipopolysaccharide (LPS) stimulation, ssc-mir-129b was significantly up-regulated alongside other miRNAs, suggesting its involvement in inflammatory responses and warranting further investigation into its potential functions and target genes within porcine PBMCs [PMC7903524]. Despite its low abundance (<10 TPM), ssc-mir-129b's up-regulation upon LPS stimulation highlights its possible regulatory role under inflammatory conditions [PMC7903524].

Genome locations

Gene Ontology annotations

Sequence

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CUUUUUGCGGUCUGGGCUUGC

Taxonomic tree

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This sequence is found in 57 other species

  1. Alligator mississippiensis ami-miR-129a-5p
  2. Anolis carolinensis (green anole) aca-miR-129a-5p
  3. Bos taurus (domestic cattle) Bta-Mir-129-P1_5p (mature (guide))
  4. Callithrix jacchus cja-miR-129
  5. Callorhinchus milii Cmi-Mir-129-P2_5p (mature (guide))
  6. Canis lupus familiaris (dog) cfa-miR-129
  7. Capra hircus chi-miR-129-5p
  8. Cavia porcellus (domestic guinea pig) cpo-miR-129-5p
  9. Cervus elaphus (red deer) cel-miR-129
  10. Chiloscyllium plagiosum microRNA cpl-miR-129
  11. Chrysemys picta bellii Cpi-Mir-129-P1_5p (mature (guide))
  12. Chrysemys picta (Painted turtle) cpi-miR-129-5p
  13. Columba livia (rock pigeon) cli-miR-129-5p
  14. Cricetulus griseus cgr-miR-129
  15. Cyprinus carpio (common carp) ccr-miR-129
  16. Danio rerio (zebrafish) Dre-Mir-129-P1b_5p (mature (guide))
  17. Dasypus novemcinctus (nine-banded armadillo) dno-miR-129-5p
  18. Echinops telfairi Ete-Mir-129-P1_5p (mature (co-guide))
  19. Eptatretus burgeri (inshore hagfish) Ebu-Mir-129-P6_5p* (star (passenger))
  20. Equus caballus eca-miR-129b-5p
  21. Gadus morhua gmo-miR-129-3-5p
  22. Gallus gallus (chicken) gga-miR-129-5p
  23. Gekko japonicus Gja-Mir-129-P1_5p (mature (co-guide))
  24. Haplochromis burtoni (Burton's mouthbrooder) abu-miR-129
  25. Homo sapiens hsa-miR-129-5p
  26. Ictalurus punctatus (channel catfish) ipu-miR-129
  27. Latimeria chalumnae Lch-Mir-129-P1_5p (mature (guide))
  28. Lepisosteus oculatus (spotted gar) Loc-Mir-129-P1_5p (mature (co-guide))
  29. Loxodonta africana (African savanna elephant) Laf-Mir-129-P1_5p (mature (guide))
  30. Macaca mulatta mml-miR-129-5p
  31. Maylandia zebra (zebra mbuna) mze-miR-129
  32. Microcaecilia unicolor Mun-Mir-129-P2_5p (mature (guide))
  33. Microcebus murinus (gray mouse lemur) Mmr-Mir-129-P1_5p (mature (guide))
  34. Monodelphis domestica (gray short-tailed opossum) Mdo-Mir-129-P2_5p (mature (guide))
  35. Monopterus albus Mal-Mir-129-P1b_5p (mature (guide))
  36. Mus musculus (house mouse) mmu-miR-129-5p
  37. Neolamprologus brichardi (lyretail cichlid) nbr-miR-129
  38. Notamacropus eugenii (tammar wallaby) Neu-Mir-129-P1_5p (mature (guide))
  39. Oreochromis niloticus (Nile tilapia) oni-miR-129
  40. Ornithorhynchus anatinus oan-miR-129-5p
  41. Oryctolagus cuniculus ocu-miR-129-5p
  42. Pan troglodytes (chimpanzee) ptr-miR-129
  43. Pongo abelii (Sumatran orangutan) Pab-Mir-129-P2_5p (mature (co-guide))
  44. Pongo pygmaeus (Bornean orangutan) ppy-miR-129-5p
  45. Pteropus alecto pal-miR-129b-5p
  46. Pundamilia nyererei pny-miR-129
  47. Python bivittatus (Burmese python) pbv-miR-129a-5p
  48. Rattus norvegicus (Norway rat) rno-miR-129-5p
  49. Salmo salar (Atlantic salmon) ssa-miR-129-5p
  50. Sarcophilus harrisii (Tasmanian devil) sha-miR-129
  51. Scyliorhinus torazame Sto-Mir-129-P2_5p (mature (guide))
  52. Sphenodon punctatus Spt-Mir-129-P1_5p (mature (guide))
  53. Taeniopygia guttata (zebra finch) tgu-miR-129-5p
  54. Tetraodon nigroviridis (spotted green pufferfish) Tni-Mir-129-P2b_5p (mature (guide))
  55. Tupaia chinensis tch-miR-129-5p
  56. Xenopus laevis (African clawed frog) Xla-Mir-129-P1d_5p* (star (passenger))
  57. Xenopus tropicalis xtr-miR-129
Relationships

Molecular Relationships

Publications