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Zea mays (maize) zma-miR169k-5p URS00004D7772_4577

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zma-miR169i-5p: Zma-mir169i-5p is a specific type of maize miRNA that has been implicated in maize induced systemic resistance (ISR) primed by Trichoderma harzianum T28 [PMC9964586]. In a study conducted by Xie et al., it was found that the expression level of zma-mir169i-5p decreased, while its target genes, NF-YA (Zm00001d018255 and Zm00001d027874), were upregulated in B73 + T28 post-inoculated with Cochliobolus heterostrophus, which is consistent with the findings of the study [PMC9964586]. Other miRNAs, such as miR825/miR825*, miR472, and miR846, as well as zma-miR169a-5p and zma-miR395b-5p, have also been reported to regulate ISR activated by different Bacillus spp., which are well-known beneficial microbial agents [PMC9964586]. In order to evaluate the roles of maize miRNAs in ISR, zma-miR169a-5p, zma-miR169c-5p, zma-mir169i-5p, and zma-miR395b-5p were selected as candidate ISR-associated miRNAs [PMC6829523]. Among these candidate ISR-associated miRNAs specifically repressed in FZB42 treatment were zma-mir169i-5p and three others [PMC6829523]. Zma-mir169i-5p was found to target 42 mRNAs while no target mRNA was identified for zma-miR395b-5p through degradome sequencing [PMC6829523]. A network was constructed to illustrate the relationship between three ISR-associated miRNAs (zma-miR169a-5p, zma-miR169c-5p, and zma-mir169i-5p) and their target mRNAs [PMC6829523]. Additionally, zma-mir169i-5p was one of the four miRNAs specifically depressed in FZB42 treatment, making it a candidate ISR-associated miRNA [PMC8839143].

Genome locations

Gene Ontology annotations

Sequence

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UAGCCAAGGAUGACUUGCCUG

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This sequence is found in 22 other species

  1. Aegilops tauschii ata-miR169i-5p
  2. Ananas comosus microRNA 169h
  3. Aquilegia coerulea (Rocky Mountain columbine) aqc-miR169b
  4. Arabidopsis lyrata (lyrate rockcress) aly-miR169j-5p
  5. Arabidopsis thaliana (thale cress) ath-miR169m
  6. Brachypodium distachyon (stiff brome) bdi-miR169e-5p
  7. Camelina sativa (false flax) cas-miR169g-5p
  8. Cucumis melo (muskmelon) cme-miR169n
  9. Gossypium herbaceum (Arabian cotton) ghb-miR169a
  10. Gossypium hirsutum ghr-miR169a
  11. Linum usitatissimum (flax) lus-miR169c
  12. Malus domestica (apple) mdm-miR169n
  13. Manihot esculenta mes-miR169s
  14. Musa AAB Group miR169
  15. Oryza sativa (Asian cultivated rice) osa-miR169k
  16. Oryza sativa Japonica Group microRNA osa-miR169h
  17. Pachycladon fastigiatum Pfa-miR169h
  18. Populus tomentosa Pto-miR169m
  19. Populus trichocarpa (black cottonwood) ptc-miR169k
  20. Solanum lycopersicum sly-miR169b
  21. Sorghum bicolor (sorghum) sbi-miR169g
  22. Theobroma cacao (cacao) tcc-miR169h
Publications