Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Rattus norvegicus (Norway rat) rno-miR-133a-3p URS00004C9052_10116

Automated summary: This miRNA sequence is 22 nucleotides long and is found in Rattus norvegicus. Annotated by 4 databases (PSICQUIC, RefSeq, PirBase, miRBase). Described in 32 papers. Rattus norvegicus (Norway rat) rno-miR-133a-3p sequence is a product of miR-133a, rno-miR-133a, miR-133, Mir133a1, miR-133a-3p, rno-miR-133a-3p genes. Found in the norway rat reference genome.

Interactions 7

According to PSICQUIC, Rattus norvegicus (Norway rat) rno-miR-133a-3p interacts with:

Interaction id Participant Synonyms
URS00004C9052_10116-4 F1LQR8 F1LQR8
URS00004C9052_10116-0 F1LQR8 F1LQR8
URS00004C9052_10116-5 P02454 P02454
URS00004C9052_10116-1 P02454 P02454
URS00004C9052_10116-3 Q9JHK1 Q9JHK1
URS00004C9052_10116-2 Q9JHK1 Q9JHK1
URS00004C9052_10116-6 Q9JHK1 Q9JHK1

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{'EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations


    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset


    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    This sequence is found in 43 other species

    1. Alligator mississippiensis ami-miR-133a-3p
    2. Anolis carolinensis aca-miR-133a
    3. Bos taurus (cattle) bta-miR-133a
    4. Callorhinchus milii (elephant shark) cmi-miR-133-2
    5. Chrysemys picta bellii Cpi-Mir-133-P4-v1_3p (mature (guide))
    6. Chrysemys picta cpi-miR-133c-3p
    7. Ciona intestinalis Cin-Mir-133_3p (mature (guide))
    8. Columba livia Cli-Mir-133-P4-v1_3p (mature (guide))
    9. Danio rerio dre-miR-133a-3p
    10. Equus caballus eca-miR-133a
    11. Gallus gallus (chicken) Gga-Mir-133-P4-v1_3p (mature (guide))
    12. Homo sapiens (human) hsa-miR-133a-3p
    13. Macaca mulatta mml-miR-133c-3p
    14. Mus musculus mmu-miR-133a-3p
    15. Ophiophagus hannah oha-miR-133a-3p
    16. Pan troglodytes (chimpanzee) ptr-miR-133a
    17. Pongo pygmaeus ppy-miR-133c
    18. Scyliorhinus torazame (cloudy catshark) Sto-Mir-133-P4-v1_3p (mature (guide))
    19. Taeniopygia guttata (zebra finch) Tgu-Mir-133-P4-v1_3p (mature (guide))
    20. Takifugu rubripes fru-miR-133
    21. Tetraodon nigroviridis tni-miR-133