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Sus scrofa (pig) ssc-miR-7-5p URS0000161522_9823

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ssc-mir-7: Ssc-mir-7 is a microRNA that is involved in various biological processes. It has a sequence of 5′UGGAAGACUAGUGAUUUUGUUGUU [PMC9659414]. The miRcute miRNA cDNA synthesis kit and primer sets were used for the quantification of ssc-mir-7 [PMC7112103]. It has been identified as a potential miRNA sponge for ssc-miR-127 and ssc-mir-7 [PMC7112103]. Knocking down the circRNA11: 19712163-19718631, which acts as a sponge for ssc-miR-127 and ssc-mir-7, resulted in an increase in the expression of ssc-miR-127 and ssc-mir-7 [PMC7112103]. Ssc-mir-7 has been found to be up-regulated in necrotic lung tissue compared to visually unaffected lung tissue of pigs infected with Actinobacillus pleuropneumoniae, suggesting its potential role during both viral and bacterial pulmonary infection in pigs [PMC5909910]. Ssc-mir-7 is one of the seven differentially expressed miRNAs that were chosen for validation by real-time RT-PCR in porcine hypothalamus and pituitary development [PMC3821617]. It has been found to be involved in the development of porcine hypothalamus [PMC3821617]. Ssc-mir-7 has also been predicted to have similar targets as PN-7–5p–1931, PN–125b–5p–19840, and miR–125b in hypothalamus, as well as PC–296–3p–8261, PC–296–3p–105798, miR145, and miR145–5p–335 in pituitary [PMC3821617]. Additionally, ssc-mir-7 has been identified as one of the highly expressed miRNAs in the anterior pituitary [PMC4489742]. It has been found to target IL-1β, IL-2, and TGF-β1 [PMC4778948].

Genome locations

Gene Ontology annotations

Sequence

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UGGAAGACUAGUGAUUUUGUUGUU

Taxonomic tree

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This sequence is found in 71 other species

  1. Acyrthosiphon pisum (pea aphid) api-miR-7
  2. Aedes aegypti Aae-Mir-7_5p (mature (guide))
  3. Alligator mississippiensis Ami-Mir-7-P2_5p (mature (guide))
  4. Anolis carolinensis (green anole) Aca-Mir-7-P1_5p (mature (guide))
  5. Bactrocera dorsalis (oriental fruit fly) bdo-miR-7
  6. Blattella germanica (German cockroach) Bge-Mir-7_5p (mature (guide))
  7. Bombyx mori (domestic silkworm) Bombyx_mori piRNA piR-bmo-12852
  8. Bos taurus bta-miR-7
  9. Callithrix jacchus (white-tufted-ear marmoset) cja-miR-7
  10. Callorhinchus milii (elephant shark) Cmi-Mir-7-P2_5p (mature (guide))
  11. Canis lupus familiaris (dog) Cfa-Mir-7-P1_5p (mature (guide))
  12. Capra hircus chi-miR-7-5p
  13. Cavia porcellus cpo-miR-7-5p
  14. Cervus elaphus (red deer) cel-miR-7
  15. Chiloscyllium plagiosum microRNA cpl-miR-7
  16. Ciona intestinalis Cin-Mir-7_5p (mature (guide))
  17. Columba livia (rock pigeon) cli-miR-7a-5p
  18. Crassostrea gigas Cgi-Mir-7_5p (mature (guide))
  19. Cyprinus carpio (common carp) ccr-miR-7a
  20. Danio rerio Dre-Mir-7-P1b_5p (mature (guide))
  21. Daphnia magna Dma-Mir-7_5p (mature (guide))
  22. Daphnia pulex Dpu-Mir-7-P10_5p (mature (guide))
  23. Dasypus novemcinctus (nine-banded armadillo) dno-miR-7-5p
  24. Dinoponera quadriceps dqu-miR-7-5p
  25. Drosophila ananassae Dan-Mir-7_5p (mature (guide))
  26. Drosophila erecta Drosophila_erecta piRNA piR-der-819708
  27. Drosophila melanogaster (fruit fly) Dme-Mir-7_5p (mature (guide))
  28. Drosophila mojavensis Dmo-Mir-7_5p (mature (guide))
  29. Drosophila simulans Dsi-Mir-7_5p (mature (guide))
  30. Drosophila virilis dvi-miR-7-5p
  31. Drosophila yakuba Dya-Mir-7_5p (mature (guide))
  32. Echinops telfairi Ete-Mir-7-P2_5p (mature (co-guide))
  33. Eptatretus burgeri Ebu-Mir-7-P5_5p (mature (guide))
  34. Gadus morhua (Atlantic cod) gmo-miR-7a-5p
  35. Gallus gallus Gga-Mir-7-P2c_5p (mature (guide))
  36. Gekko japonicus Gja-Mir-7-P2_5p (mature (co-guide))
  37. Heliconius melpomene Hme-Mir-7_5p (mature (guide))
  38. Homo sapiens hsa-miR-7-5p
  39. Hyalella azteca miR-7a
  40. Ixodes scapularis (black-legged tick) Isc-Mir-7_5p (mature (guide))
  41. Latimeria chalumnae Lch-Mir-7-P1_5p (mature (guide))
  42. Lepisosteus oculatus Loc-Mir-7-P1_5p (mature (guide))
  43. Lingula anatina Lan-Mir-7_5p (mature (guide))
  44. Lottia gigantea lgi-miR-7
  45. Macaca mulatta Mml-Mir-7-P1_5p (mature (guide))
  46. Manduca sexta (tobacco hornworm) mse-miR-7
  47. Maylandia zebra mze-miR-7a
  48. Microcaecilia unicolor Mun-Mir-7-P1f_5p (mature (guide))
  49. Monodelphis domestica Mdo-Mir-7-P2_5p (mature (co-guide))
  50. Monopterus albus (swamp eel) Mal-Mir-7-P3_5p (mature (guide))
  51. Mus musculus Mmu-Mir-7-P1_5p (mature (guide))
  52. Nautilus pompilius Npo-Mir-7_5p (mature (guide))
  53. Ophiophagus hannah oha-miR-7-5p
  54. Ornithorhynchus anatinus (platypus) Oan-Mir-7-P1_5p (mature (guide))
  55. Oryctolagus cuniculus ocu-miR-7a-5p
  56. Penaeus japonicus miR-7
  57. Petromyzon marinus Pma-Mir-7-o1_5p (mature (guide))
  58. Polistes canadensis pca-miR-7-5p
  59. Pteropus alecto pal-miR-7b-5p
  60. Python bivittatus pbv-miR-7-5p
  61. Rattus norvegicus (Norway rat) Rno-Mir-7-P1_5p (mature (guide))
  62. Sarcophilus harrisii (Tasmanian devil) Sha-Mir-7-P2_5p (mature (co-guide))
  63. Scyliorhinus torazame (cloudy catshark) Sto-Mir-7-P1_5p (mature (guide))
  64. Sphenodon punctatus (tuatara) Spt-Mir-7-P1_5p (mature (guide))
  65. Taeniopygia guttata Tgu-Mir-7-P1_5p (mature (guide))
  66. Tetranychus urticae (two-spotted spider mite) tur-miR-7-5p
  67. Tribolium castaneum (red flour beetle) Tca-Mir-7_5p (mature (guide))
  68. Triops cancriformis tcf-miR-7
  69. Tupaia chinensis (Chinese tree shrew) tch-miR-7-5p
  70. Xenopus laevis Xla-Mir-7-P3b_5p (mature (guide))
  71. Xenopus tropicalis (tropical clawed frog) Xtr-Mir-7-P1_5p (mature (guide))
Publications