Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Mus musculus (house mouse) mmu-miR-411-5p URS00000C5BAA_10090

Automated summary: This piRNA sequence is 21 nucleotides long and is found in Mus musculus. Annotated by 7 databases (RefSeq, miRBase, PirBase, ENA, TarBase, MirGeneDB, LncBase). Described in 21 papers. Mus musculus (house mouse) mmu-miR-411-5p sequence is a product of Mir411, miR-411, mmu-miR-411, miR-411-5p, mmu-miR-411-5p genes. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 1110007A06Rik, 1110011C18Rik, 1200008D14Rik, 1200012P04Rik, 5730478E03Rik, 9130414A06Rik, A930010I20Rik, Alyref, Atp1a1, Atpa-1.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{'EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations


    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset


    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    This sequence is found in 17 other species

    1. Bos taurus (cattle) Bta-Mir-154-P13_5p (mature (guide))
    2. Callithrix jacchus (white-tufted-ear marmoset) cja-miR-411
    3. Canis lupus familiaris Cfa-Mir-154-P13_5p (mature (guide))
    4. Cavia porcellus (domestic guinea pig) cpo-miR-411-5p
    5. Dasypus novemcinctus dno-miR-411-5p
    6. Echinops telfairi (small Madagascar hedgehog) Ete-Mir-154-P13_5p (mature (guide))
    7. Equus caballus eca-miR-411
    8. Homo sapiens hsa-miR-411-5p
    9. Macaca mulatta mml-miR-411-5p
    10. Microcebus murinus (gray mouse lemur) mmr-miR-411a
    11. Oryctolagus cuniculus ocu-miR-411-5p
    12. Otolemur garnettii oga-miR-411a
    13. Pan paniscus (pygmy chimpanzee) ppa-miR-411a
    14. Pan troglodytes ptr-miR-411
    15. Papio hamadryas pha-miR-411a
    16. Pongo pygmaeus ppy-miR-411
    17. Rattus norvegicus (Norway rat) rno-miR-411-5p
    18. Tupaia chinensis tch-miR-411-5p