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Zea mays zma-miR169c-5p URS00000036DB_4577

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zma-miR169c-5p: Zma-mir169c-5p is a candidate miRNA that has been reported to regulate the induced systemic resistance (ISR) activated by different Bacillus spp. [PMC9964586]. In a study using microarray and degradome sequencing, zma-mir169c-5p was identified as one of the five selected miRNAs, along with zma-miR393a-5p_L+1R-2, zma-miR164e-5p, PC-3p-73272_34, and PC-3p-169098_11 [PMC9697682]. The targets of zma-mir169c-5p were found to be nuclear factor Y (NY), auxin signaling F-box 2 (AFB2), NAC domain containing protein 80 (NAC), metacaspase 1 (AMC1), and thioredoxin family protein (Trx) [PMC9697682]. Zma-mir169c-5p belongs to the miR169 family and is part of a network with zma-miR169a-5p and zma-miR169i-5p that is associated with ISR [PMC6829523]. It was not selected as one of the candidate ISR-associated miRNAs along with zma-miR169a-5p, zma-miR395b-5p, and zma-mir395b-p [PMC6829523] [PMC8839143]. These four miRNAs were specifically repressed in FZB42 treatment and considered as potential ISR-associated miRNAs [PMC6829523] [PMC8839143]. In conclusion, zma-mir169c-p is a candidate miRNA that plays a role in regulating ISR in maize.

Genome locations

Gene Ontology annotations

Sequence

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CAGCCAAGGAUGACUUGCCGG

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This sequence is found in 28 other species

  1. Aegilops tauschii ata-miR169d-5p
  2. Ananas comosus (pineapple) microRNA 169c
  3. Aquilegia coerulea aqc-miR169c
  4. Arabidopsis lyrata aly-miR169c-5p
  5. Arabidopsis thaliana ath-miR169c
  6. Brachypodium distachyon bdi-miR169f
  7. Brassica napus (rape) bna-miR169n
  8. Camelina sativa (false flax) cas-miR169b
  9. Citrus sinensis (sweet orange) csi-miR169m-5p
  10. Cucumis melo (muskmelon) cme-miR169f
  11. Glycine max gma-miR169f
  12. Linum usitatissimum (flax) lus-miR169j
  13. Malus domestica (apple) mdm-miR169i
  14. Manihot esculenta mes-miR169b
  15. Medicago truncatula mtr-miR169g
  16. Nicotiana tabacum (common tobacco) nta-miR169s
  17. Oryza sativa Japonica Group microRNA osa-miR169b
  18. Oryza sativa (rice) osa-miR169b
  19. Petunia x hybrida microRNA mirBL
  20. Populus tomentosa Pto-miR169d
  21. Populus trichocarpa ptc-miR169g
  22. Prunus persica ppe-miR169c
  23. Ricinus communis (castor bean) rco-miR169b
  24. Solanum lycopersicum sly-miR169a
  25. Sorghum bicolor sbi-miR169b
  26. Theobroma cacao tcc-miR169b
  27. Vigna unguiculata (cowpea) vun-miR169
  28. Vitis vinifera vvi-miR169a
Publications