Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Zea mays zma-miR169c-5p URS00000036DB_4577

Caution, this is an AI generated summary based on literature. This may have errors, see here for more. Please share your feedback with us.

zma-miR169c-5p: Zma-mir169c-5p is a candidate miRNA that has been reported to regulate the induced systemic resistance (ISR) activated by different Bacillus spp. [PMC9964586]. In a study using microarray and degradome sequencing, zma-mir169c-5p was identified as one of the five selected miRNAs, along with zma-miR393a-5p_L+1R-2, zma-miR164e-5p, PC-3p-73272_34, and PC-3p-169098_11 [PMC9697682]. The targets of zma-mir169c-5p were found to be nuclear factor Y (NY), auxin signaling F-box 2 (AFB2), NAC domain containing protein 80 (NAC), metacaspase 1 (AMC1), and thioredoxin family protein (Trx) [PMC9697682]. Zma-mir169c-5p belongs to the miR169 family and is part of a network with zma-miR169a-5p and zma-miR169i-5p that is associated with ISR [PMC6829523]. It was not selected as one of the candidate ISR-associated miRNAs along with zma-miR169a-5p, zma-miR395b-5p, and zma-mir395b-p [PMC6829523] [PMC8839143]. These four miRNAs were specifically repressed in FZB42 treatment and considered as potential ISR-associated miRNAs [PMC6829523] [PMC8839143]. In conclusion, zma-mir169c-p is a candidate miRNA that plays a role in regulating ISR in maize.

Genome locations

Gene Ontology annotations


Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

Search for similar sequences

Taxonomic tree

View annotations in different species by clicking on species names.

Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

This sequence is found in 28 other species

  1. Aegilops tauschii ata-miR169d-5p
  2. Ananas comosus (pineapple) microRNA 169c
  3. Aquilegia coerulea aqc-miR169c
  4. Arabidopsis lyrata aly-miR169c-5p
  5. Arabidopsis thaliana ath-miR169c
  6. Brachypodium distachyon bdi-miR169f
  7. Brassica napus (rape) bna-miR169n
  8. Camelina sativa (false flax) cas-miR169b
  9. Citrus sinensis (sweet orange) csi-miR169m-5p
  10. Cucumis melo (muskmelon) cme-miR169f
  11. Glycine max gma-miR169f
  12. Linum usitatissimum (flax) lus-miR169j
  13. Malus domestica (apple) mdm-miR169i
  14. Manihot esculenta mes-miR169b
  15. Medicago truncatula mtr-miR169g
  16. Nicotiana tabacum (common tobacco) nta-miR169s
  17. Oryza sativa Japonica Group microRNA osa-miR169b
  18. Oryza sativa (rice) osa-miR169b
  19. Petunia x hybrida microRNA mirBL
  20. Populus tomentosa Pto-miR169d
  21. Populus trichocarpa ptc-miR169g
  22. Prunus persica ppe-miR169c
  23. Ricinus communis (castor bean) rco-miR169b
  24. Solanum lycopersicum sly-miR169a
  25. Sorghum bicolor sbi-miR169b
  26. Theobroma cacao tcc-miR169b
  27. Vigna unguiculata (cowpea) vun-miR169
  28. Vitis vinifera vvi-miR169a