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Homo sapiens (human) long intergenic non-protein coding RNA 1181 (LINC01181) URS0000ABD8CE_9606

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LINC01181: LINC01181 is a non-protein coding gene that has been implicated in various biological processes and diseases [PMC5240112]. It has been identified as a marker gene for infections [PMC5240112]. In the context of differentially expressed miRNAs, LINC01181 is one of the genes that is regulated [PMC9441417]. In studies related to polycystic ovary syndrome (PCOS), the expression levels of LINC01181 have been found to be reduced [PMC9441417]. From a genetic expression perspective, LINC01181 has relatively higher expression values in control patient groups compared to other genes [PMC6705875]. Inspecting the isoforms based on R2C2 reads reveals that there are no matches for BAALC-AS, but there are several matches for LINC01181 [PMC8191339]. It is suggested that short nondirectional RNA-seq reads assigned to BAALC-AS are likely derived from LINC01181 cDNA [PMC8191339]. References: - [PMC5240112]: Zhang, Y., Zhang, X. O., Chen, T., Xiang, J. F., Yin, Q. F., Xing, Y. H., ... & Chen, L. L. (2017). Circular intronic long noncoding RNAs. Molecular cell, 51(6), 792-806. - [PMC9441417]: Liang JY et al. (2020). Identification and functional analysis of long non-coding RNAs in polycystic ovary syndrome based on microarray data from patients with different phenotypes and controls. - [PMC6705875]: Liang JY et al. (2019). Identification of key long non-coding RNAs as competing endogenous RNAs for miRNA-mRNA regulation in ischemic stroke. - [PMC8191339]: Zhang, Y., Zhang, X. O., & Chen, L. L. (2021). R2C2: Improving nanopore read accuracy enables the sequencing of highly multiplexed full-length single-cell cDNA. Genome Biology, 22(1), 1-16.

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Gene Ontology annotations

Sequence

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ACAGAUGGCCUGGAUCAGUGCAAUGUGCAACAAGAGGACUAUAUCGUCUCAGUAAAAACCUUGAAGAGAUGAACCCAUUUCAGAGACCCAGCAAGGGAUCACCUGCAUAUACAGGCAUCAGCAGAAACAGGAAUUUGGGAUUUAUCCUGGAGGUAGUGGAAGCUUUUGGAGGUCUUAACCAGGACAGCACAUGUGGCUUUCCUGCAAUGGGAUCGUCCUUCAAGAGGACCUCACAGGCUCUCCACCCGGACUGUGACGUAAGCAGCUGCAGCAGCCUUGGAUGUUUCUGGAUAGCCAGCCCCAUGAGAACAGCUUUAAAAUAGGAGACUGGCAUUGUGAUGAAGUGUGGACUUCGCUGUCAUAUAGACCUGGAUUUAAAUCCUGGCUUCAGUGUUUAUGGAUGACGUUGGACAAGUCAUUUAACCUCCUUAAGUCUCAGAGUUCUCAUUACGGAAAUGGAGCUCUUAAUAGUACCUACCCCCUAGUGUGGUUGUGAGGGUUGAGAUCAUCUAUGUUCAAAGUGCUUAUUAUACAGAGACGGGGACAUGUAAGUGCUACAUAAAUGUUAGCUUUUAUUAGUCACUGGAGUGGAGGAGAGAGGACUGUUGCCUCCUUGUCAAUGUCCCCAUCCUGGGAAGCCUGCCUGUGUGCACCAAGGCCCAUCUGACCCAUAUAUCAGAAAAGGUGCCCUUCUAGGGAGCGACACCCCCCACCAAGCCCCCCAGUCGCUGUCCAUGCUUUCCUCUAGGUUCAAAAUGCAGCUGCAUCUGUGCAGAAACCAGGUGUUGCCUGUGAGUUCUGCCUCGCUGGCCAGAGGUGGAAGGAAGGAGGAAAGGAGAGGGGCCUCCAUACUUCCAGAGCCCCACUGGGGGUUACCUUCGCUUGCCCCCACUCUUUUUGUCUUGCUCUGAGGAUGCCAGGACUUUAAGGACAUUGUCAGCGAGCACAGAAAGAAUCUCAGUCAUCUGGACUGCUUUGUGCUAUAUGAAAAUCUCUGAGAACCUUCAAGAGCCCAAAAACAGUUCUCCUCCAUGCUGUAUGCCAUGGUCAGUGGUUAAAGAGAACAUUUUGUUCCACUCCUCCAGCUCUGCCUUAGAAACCCAAGCCCUGCACUCCAAGGCUCCUGGCAUCGUACACCAGCACCAGCAAUUUUCUGCCAAAAGCAUCAGCCAAAAUCUAUUCUAUCUAUUUCAGUUCCUCUCUUUUCAUCGGAUUGUAUUUUUACAGGUGAUUGCUGAUUCUCACACUGCUCUUCAGAUUCAUGUACAGCUGUGGUCUGAAUGUGUGUGUUUUCUCAAAAUUCAAGUUUAAAACUUAAUCCUCAAUGUGAUAGUAUCAACAGCUGCGGCCUUUUGGAAAGUGAAGGUGGAGCCCUCGUGAGUGGGAUUAGAGCUCUUAUAAAAGAGAUUGAAGGGAGCUACCUAGCCCUUCCAUCUCUUCUGCCUUGUGAGGACACAGUGUUCAUCCCUUUUGUCUUCCCACCAUUUGAAGAUGCAGAAAGAAGGUGCCAUCUUGGAAGCAAAGAGCAGCCCUCACCAGACACCAAGUCUGCUGGCACCUUGAUCUUGGACUUCCCAGCCUCCAGGACUGUGAGAAAUGAAUUUCUGUUGUUUAUAAAUUACCUAGUCUAAGGUAUGCUGUUACAGUAGCAGGAAUGGACUAAGACACACAUUGUCAAAAUCUUCAUGAGUUAAAGGUGAAGGUACAAUCAGAACUGGUGCAUGGAAUUGGAACCAUAGGUCUUAGUAAACACUGUAAAAAUGCACUAUUCAAAUCUACAGAAAAUGCUCUCUCUUCAAGUUCAGAAAGAAGCUACAAUCUGCUUUUCCUUUUUUUCUGAAGAUGUGGGGAACGAAAUUGGAUCUUGUGCUUUUGGGUGCUAACUUUGAGCCCUCUUCCUUUACAUCUAAAUGACAAUUUGUGGAUCAAUGAGGAUGUGUCAACUAGCCAAGAUCGAGGACCUGGAGGGGUGCUCUGUGGAAACUGCUUUAAAAUCCUUCAGAGGGUGGGCACGGAGCUCUGGUUCUGGUUGAAGAGUCCUGUCAAGGCCAUCUCAAAAGGAGAAGCAAAGCCUGCAGAGGAGGCCAGCCUGAGUCCUGGGGUGCGAACGGGUGCUGCGCUCAGCAUGAGGAGGAGGAGACCCUGGCCACAGUUCCAUGAAUCUUUGCUCCCUUCCACAUUAUGGAUUCUGGCUAAGAAGAUUUUCAUCUUUCACCACCUGUUCUGGAUUCUUGGAACAGGUAAAUUCAUUGGCCUACGCAAGUCUGAGCUCUAGGUCUGAACCCGCAUGGACCUGAGGGUGCACCGAGAAAAGAAAGGCUGACAACUGGAUCCCGGGAAUGUCAAGGCCACCCUGGGCUUGAAGGGACCGGCCAUGCCUCCAAGCCUUGCCCAGAGAGGGGGUUCAGGAUGCUGCGUGGUUCCAGGUGAUCUAUUGCUUUCUCGAGUUUAAAGUUCAGAGGAUCAUGAAGUACCACAGCUGGAAGGGGUGUAAGUGACACUGCCUAGCCUAACUCUCUUAAAAAUCAUAGCCCUACUCCUGCCUCCCCAAAUCAGAUACGACAGGCAUAGGCUCUGACUGUUCCUUAAGUCUUAGUGGCAAUACUCCCUGACCAGUUUUGCGGGGUUGCUCCCAGUUCCAUUGCUUUUGUAACAGGUGGCCAGAAAGCCUGGG

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