Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Homo sapiens (human) long intergenic non-protein coding RNA 2549 (LINC02549) URS00007E490F_9606

Caution, this is an AI generated summary based on literature. This may have errors, see here for more. Please share your feedback with us.

LINC02549: LINC02549, also known as Long Intergenic Protein Coding RNA 2549, is an RNA gene that belongs to the lncRNA class, which makes up a significant portion of the human transcriptome [PMC8579100]. Carriers of two copies of the LINC02549 rs7767069T allele have been found to have increased levels of soluble scavenger receptors CD5 and CD6 in their serum [PMC8579100]. These receptors are highly expressed in regulatory T cells and a specific subset of B cells [PMC8579100]. It is hypothesized that the LINC02549 rs7767069 SNP may negatively impact the response to anti-TNF drugs by stimulating the production of these soluble receptors and inducing long-term T cell-mediated immune responses [PMC8579100]. A meta-analysis showed that each copy of the LINC02549 rs7767069T allele significantly decreased improvement in DAS28 by 17% after treatment with a TNFi [PMC8579100]. This suggests that LINC02549 may play a role in modulating CD45RA+CD45RO+ T lymphocytes, which could promote inflammatory responses and hinder inflammation control during anti-TNF drug treatment [PMC8579100]. The overall linear regression analysis revealed that several SNPs, including LINC02549 rs7767069, had a significant effect on TNFi response in rheumatoid arthritis patients [PMC8579100]. The association between LINC02549 rs7767069 and poor response to TNFi was significant in two populations analyzed and remained significant after multiple testing correction [PMC8579100]. Functional experiments showed that the LINC02549 rs7767069 polymorphism correlated with increased numbers of CD45RO+CD45RA+ T cells in blood [PMC8579100]. This suggests that this genetic marker may influence TNFi response by modulating this specific T cell subset and contributing to inflammation [PMC8579100]. A recent meta-analysis confirmed the association between LINC02549 rs7767069 and a lower response to TNFi [PMC8879844].

Genome locations

Gene Ontology annotations

Sequence

Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

Search for similar sequences
UCACAAGGGAAAGCAUAUGUAGAUUGAAGCUAUGCAGAAUGAAGUCUCAACAGCUGAAGCUUACUGGGGAACCAAUGGUGCCCUAAAUUAAGAUAAUUUAUGAAAUGUUGGUCUCCCUCUGUUGCUGCCCAGGCUCCAGGCUGAAGUGCAGAGGCAUGAUCUUGGCUCACUGCCGCCUCCUCUUCCCAGGCUCAAGCGAUCCUCCCACAUUUGCCUCCUGAGUAGCUGAGACUACAGUCUUGCCUUGUCACCCAGGCUGGAGUGCAAUGGCACAAUCUCGGCUCACUGCAAUCUCUGCCUCCCAGGUUCAAGUGAUUCUUCUGCCUCAGCCUCCCAAGCAACUGGGACUACAGCCCCUGAAAAGUAGCAGCAAUGUGCCCUGCAACAGAAUCUGCACACUACAGAGAUACUACAAAAGCUACCAUGAAGAAGCUACAUAGAUGAUCACUGGGUUGUACCUCUCAAGUACUUUCUCAGAAGCCACAUCCAUGUUAUUGCUGAGAGUACAUGCUUUGCUAUAAACCCUAACUGGGUUGAAUCCUGGCUGUGCCACUUAGUAGCUAAGAGAUUUUGACCAAAUCACUGGCAGAGACCUUUGUCCCCUUGUCUAUGAAAUAAAAUAAAAAUAGCUACCGCUCUGAGAUUUUUCAAUAAAACCUGUUAAAUUUUACAAGGU

Taxonomic tree

View annotations in different species by clicking on species names.

Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

Publications