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Saccharomyces cerevisiae S288C 15S ribosomal RNA secondary structure diagram

Saccharomyces cerevisiae S288C 15S ribosomal RNA URS000060F99B_559292

Automated summary: This rRNA sequence is 1,649 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 2 databases (SGD, ENA). Described in 60 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Saccharomyces cerevisiae S288C 15S ribosomal RNA sequence is a product of 15S_RRNA gene. Found in the Saccharomyces cerevisiae S288C reference genome.

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GUAAAAAAUUUAUAAGAAUAUGAUGUUGGUUCAGAUUAAGCGCUAAAUAAGGACAUGACACAUGCGAAUCAUACGUUUAUUAUUGAUAAGAUAAUAAAUAUGUGGUGUAAACGUGAGUAAUUUUAUUAGGAAUUAAUGAACUAUAGAAUAAGCUAAAUACUUAAUAUAUUAUUAUAUAAAAAUAAUUUAUAUAAUAAAAAGGAUAUAUAUAUAAUAUAUAUUUAUCUAUAGUCAAGCCAAUAAUGGUUUAGGUAGUAGGUUUAUUAAGAGUUAAACCUAGCCAACGAUCCAUAAUCGAUAAUGAAAGUUAGAACGAUCACGUUGACUCUGAAAUAUAGUCAAUAUCUAUAAGAUACAGCAGUGAGGAAUAUUGGACAAUGAUCGAAAGAUUGAUCCAGUUACUUAUUAGGAUGAUAUAUAAAAAUAUUUUAUUUUAUUUAUAAAUAUUAAAUAUUUAUAAUAAUAAUAAUAAUAAUAUAUAUAUAUAAAUUGAUUAAAAAUAAAAUCCAUAAAUAAUUAAAAUAAUGAUAUUAAUUACCAUAUAUAUUUUUAUAUGGAUAUAUAUAUUAAUAAUAAUAUUAAUUUUAUUAUUAUUAAUAAUAUAUUUUAAUAGUCCUGACUAAUAUUUGUGCCAGCAGUCGCGGUAACACAAAGAGGGCGAGCGUUAAUCAUAAUGGUUUAAAGGAUCCGUAGAAUGAAUUAUAUAUUAUAAUUUAGAGUUAAUAAAAUAUAAUUAAAGAAUUAUAAUAGUAAAGAUGAAAUAAUAAUAAUAAUUAUAAGACUAAUAUAUGUGAAAAUAUUAAUUAAAUAUUAACUGACAUUGAGGGAUUAAAACUAGAGUAGCGAAACGGAUUCGAUACCCGUGUAGUUCUAGUAGUAAACUAUGAAUACAAUUAUUUAUAAUAUAUAUUAUAUAUAAAUAAUAAAUGAAAAUGAAAGUAUUCCACCUGAAGAGUACGUUAGCAAUAAUGAAACUCAAAACAAUAGACGGUUACAGACUUAAGCAGUGGAGCAUGUUAUUUAAUUCGAUAAUCCACGACUAACCUUACCAUAUUUUGAAUAUUAUAAUAAUUAUUAUAAUUAUUAUAUUACAGGCGUUACAUUGUUGUCUUUAGUUCGUGCUGCAAAGUUUUAGAUUAAGUUCAUAAACGAACAAAACUCCAUAUAUAUAAUUUUAAUUAUAUAUAAUUUUAUAUUAUUUAUUAAUAUAAAGAAAGGAAUUAAGACAAAUCAUAAUGAUCCUUAUAAUAUGGGUAAUAGACGUGCUAUAAUAAAAUGAUAAUAAAAUUAUAUAAAAUAUAUUUAAUUAUAUUUAAUUAAUAAUAUAAAACAUUUUAAUUUUUAAUAUAUUUUUUUAUUAUAUAUUAAUAUGAAUUAUAAUCUGAAAUUCGAUUAUAUGAAAAAAGAAUUGCUAGUAAUACGUAAAUUAGUAUGUUACGGUGAAUAUUCUAACUGUUUCGCACUAAUCACUCAUCACGCGUUGAAACAUAUUAUUAUCUUAUUAUUUAUAUAAUAUUUUUUAAUAAAUAUUAAUAAUUAUUAAUUUAUAUUUAUUUAUAUCAGAAAUAAUAUGAAUUAAUGCGAAGUUGAAAUACAGUUACCGUAGGGGAACCUGCGGUGGGCUUAUAAAUAUCUUAAAUAUUCUUACA

    Taxonomic tree

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    This sequence is found in 3 other species

    1. Saccharomyces cerevisiae 15S ribosomal RNA from Saccharomyces cerevisiae (PDB 5MRF, chain aa)
    2. Saccharomyces cerevisiae YJM1307 15S ribosomal RNA
    3. Saccharomyces cerevisiae YJM1478 15S ribosomal RNA
    2D structure New