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Homo sapiens (human) metastasis associated in lung adenocarcinoma transcript 1 long isoform secondary structure diagram

Homo sapiens (human) metastasis associated in lung adenocarcinoma transcript 1 long isoform URS00005B7DD8_9606

  • 8,352 nucleotides
  • 2 databases (ENA, GeneCards)
  • Found in 1 species
  • ncRNA

Automated summary: This sRNA sequence is 8,352 nucleotides long and is found in Homo sapiens. Annotated by 2 databases (ENA, GeneCards). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 2 Rfam families (MALAT1, mascRNA-menRNA). Homo sapiens (human) metastasis associated in lung adenocarcinoma transcript 1 long isoform sequence is a product of RF01684-002 gene. Found in the human reference genome.

Genome locations

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This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
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  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GAUCAGAGUGGGCCACUGCCAGCCAACGGCCCCCGGGGCUCAGGCGGGGAGCAGCUCUGUGGUGUGGGAUUGAGGCGUUUUCCAAGAGUGGGUUUUCACGUUUCUAAGAUUUCCCAAGCAGACAGCCCGUGCUGCUCCGAUUUCUCGAACAAAAAAGCAAAACGUGUGGCUGUCUUGGGAGCAAGUCGCAGGACUGCAAGCAGUUGGGGGAGAAAGUCCGCCAUUUUGCCACUUCUCAACCGUCCCUGCAAGGCUGGGGCUCAGUUGCGUAAUGGAAAGUAAAGCCCUGAACUAUCACACUUUAAUCUUCCUUCAAAAGGUGGUAAACUAUACCUACUGUCCCUCAAGAGAACACAAGAAGUGCUUUAAGAGGCGGCGGAAGGUGAUCGAAUUCCGGUGAUGCGAGUUGUUCUCCGUCUAUAAAUACGCCUCGCCCGAGCUGUGCGGUAGGCAUUGAGGCAGCCAGCGCAGGGGCUUCUGCUGAGGGGGCAGGCGGAGCUUGAGGAAACCGCAGAUAAGUUUUUUUCUCUUUGAAAGAUAGAGAUUAAUACAACUACUUAAAAAAUAUAGUCAAUAGGUUACUAAGAUAUUGCUUAGCGUUAAGUUUUUAACGUAAUUUUAAUAGCUUAAGAUUUUAAGAGAAAAUAUGAAGACUUAGAAGAGUAGCAUGAGGAAGGAAAAGAUAAAAGGUUUCUAAAACAUGACGGAGGUUGAGAUGAAGCUUCUUCAUGGAGUAAAAAAUGUAUUUAAAAGAAAAUUGAGAGAAAGGACUACAGAGCCCCGAAUUAAUACCAAUAGAAGGGCAAUGCUUUUAGAUUAAAAUGAAGGUGACUUAAACAGCUUAAAGUUUAGUUUAAAAGUUGUAGGUGAUUAAAAUAAUUUGAAGGCGAUCUUUUAAAAAGAGAUUAAACCGAAGGUGAUUAAAAGACCUUGAAAUCCAUGACGCAGGGAGAAUUGCGUCAUUUAAAGCCUAGUUAACGCAUUUACUAAACGCAGACGAAAAUGGAAAGAUUAAUUGGGAGUGGUAGGAUGAAACAAUUUGGAGAAGAUAGAAGUUUGAAGUGGAAAACUGGAAGACAGAAGUACGGGAAGGCGAAGAAAAGAAUAGAGAAGAUAGGGAAAUUAGAAGAUAAAAACAUACUUUUAGAAGAAAAAAGAUAAAUUUAAACCUGAAAAGUAGGAAGCAGAAGAGAAAAGACAAGCUAGGAAACAAAAAGCUAAGGGCAAAAUGUACAAACUUAGAAGAAAAUUGGAAGAUAGAAACAAGAUAGAAAAUGAAAAUAUUGUCAAGAGUUUCAGAUAGAAAAUGAAAAACAAGCUAAGACAAGUAUUGGAGAAGUAUAGAAGAUAGAAAAAUAUAAAGCCAAAAAUUGGAUAAAAUAGCACUGAAAAAAUGAGGAAAUUAUUGGUAACCAAUUUAUUUUAAAAGCCCAUCAAUUUAAUUUCUGGUGGUGCAGAAGUUAGAAGGUAAAGCUUGAGAAGAUGAGGGUGUUUACGUAGACCAGAACCAAUUUAGAAGAAUACUUGAAGCUAGAAGGGGAAGUUGGUUAAAAAUCACAUCAAAAAGCUACUAAAAGGACUGGUGUAAUUUAAAAAAAACUAAGGCAGAAGGCUUUUGGAAGAGUUAGAAGAAUUUGGAAGGCCUUAAAUAUAGUAGCUUAGUUUGAAAAAUGUGAAGGACUUUCGUAACGGAAGUAAUUCAAGAUCAAGAGUAAUUACCAACUUAAUGUUUUUGCAUUGGACUUUGAGUUAAGAUUAUUUUUUAAAUCCUGAGGACUAGCAUUAAUUGACAGCUGACCCAGGUGCUACACAGAAGUGGAUUCAGUGAAUCUAGGAAGACAGCAGCAGACAGGAUUCCAGGAACCAGUGUUUGAUGAAGCUAGGACUGAGGAGCAAGCGAGCAAGCAGCAGUUCGUGGUGAAGAUAGGAAAAGAGUCCAGGAGCCAGUGCGAUUUGGUGAAGGAAGCUAGGAAGAAGGAAGGAGCGCUAACGAUUUGGUGGUGAAGCUAGGAAAAAGGAUUCCAGGAAGGAGCGAGUGCAAUUUGGUGAUGAAGGUAGCAGGCGGCUUGGCUUGGCAACCACACGGAGGAGGCGAGCAGGCGUUGUGCGUAGAGGAUCCUAGACCAGCAUGCCAGUGUGCCAAGGCCACAGGGAAAGCGAGUGGUUGGUAAAAAUCCGUGAGGUCGGCAAUAUGUUGUUUUUCUGGAACUUACUUAUGGUAACCUUUUAUUUAUUUUCUAAUAUAAUGGGGGAGUUUCGUACUGAGGUGUAAAGGGAUUUAUAUGGGGACGUAGGCCGAUUUCCGGGUGUUGUAGGUUUCUCUUUUUCAGGCUUAUACUCAUGAAUCUUGUCUGAAGCUUUUGAGGGCAGACUGCCAAGUCCUGGAGAAAUAGUAGAUGGCAAGUUUGUGGGUUUUUUUUUUUUACACGAAUUUGAGGAAAACCAAAUGAAUUUGAUAGCCAAAUUGAGACAAUUUCAGCAAAUCUGUAAGCAGUUUGUAUGUUUAGUUGGGGUAAUGAAGUAUUUCAGUUUUGUGAAUAGAUGACCUGUUUUUACUUCCUCACCCUGAAUUCGUUUUGUAAAUGUAGAGUUUGGAUGUGUAACUGAGGCGGGGGGGAGUUUUCAGUAUUUUUUUUUGUGGGGGUGGGGGCAAAAUAUGUUUUCAGUUCUUUUUCCCUUAGGUCUGUCUAGAAUCCUAAAGGCAAAUGACUCAAGGUGUAACAGAAAACAAGAAAAUCCAAUAUCAGGAUAAUCAGACCACCACAGGUUUACAGUUUAUAGAAACUAGAGCAGUUCUCACGUUGAGGUCUGUGGAAGAGAUGUCCAUUGGAGAAAUGGCUGGUAGUUACUCUUUUUUCCCCCCACCCCCUUAAUCAGACUUUAAAAGUGCUUAACCCCUUAAACUUGUUAUUUUUUACUUGAAGCAUUUUGGGAUGGUCUUAACAGGGAAGAGAGAGGGUGGGGGAGAAAAUGUUUUUUUCUAAGAUUUUCCACAGAUGCUAUAGUACUAUUGACAAACUGGGUUAGAGAAGGAGUGUACCGCUGUGCUGUUGGCACGAACACCUUCAGGGACUGGAGCUGCUUUUAUCCUUGGAAGAGUAUUCCCAGUUGAAGCUGAAAAGUACAGCACAGUGCAGCUUUGGUUCAUAUUCAGUCAUCUCAGGAGAACUUCAGAAGAGCUUGAGUAGGCCAAAUGUUGAAGUUAAGUUUUCCAAUAAUGUGACUUCUUAAAAGUUUUAUUAAAGGGGAGGGGCAAAUAUUGGCAAUUAGUUGGCAGUGGCGUGUUACGGUGGGAUUGGUGGGGUGGGUUUAGGUAAUUGUUUAGUUUAUGAUUGCAGAUAAACUCAUGCCAGAGAACUUAAAGUCUUAGAAUGGAAAAAGUAAAGAAAUAUCAACUUCCAAGUUGGCAAGUAACUCCCAAUGAUUUAGUUUUUUUCCCCCCAGUUUGAAUUGGGAAGCUGGGGGAAGUUAAAUAUGAGCCACUGGGUGUACCAGUGCAUUAAUUUGGGCAAGGAAAGUGUCAUAAUUUGAUACUGUAUCUGUUUUCCUUCAAAGUAUAGAGCUUUUGGGGAAGGAAAGUAUUGAACUGGGGGUUGGUCUGGCCUACUGGGCUGACAUUAACUACAAUUAUGGGAAAUGCAAAAGUUGUUUGGAUAUGGUAGUGUGUGGUUCUCUUUUGGAAUUUUUUUCAGGUGAUUUAAUAAUAAUUUAAAACUACUAUAGAAACUGCAGAGCAAAGGAAGUGGCUUAAUGAUCCUGAAGGGAUUUCUUCUGAUGGUAGCUUUUGUAUUAUCAAGUAAGAUUCUAUUUUCAGUUGUGUGUAAGCAAGUUUUUUUUUAGUGUAGGAGAAAUACUUUUCCAUUGUUUAACUGCAAAACAAGAUGUUAAGGUAUGCUUCAAAAAUUUUGUAAAUUGUUUAUUUUAAACUUAUCUGUUUGUAAAUUGUAACUGAUUAAGAAUUGUGAUAGUUCAGCUUGAAUGUCUCUUAGAGGGUGGGCUUUUGUGAUGAGGGAGGGGAAACUUUUUUUUUUUCUAUAGACUUUUUUCAGAUAACAUCUUCUGAGUCAUAACCAGCCUGGCAGUAUGAUGGCCUAGAUGCAGAGAAAACAGCUCCUUGGUGAAUUGAUAAGUAAAGGCAGAAAAGAUUAUAUGUCAUACCUCCAUUGGGGAAUAAGCAUAACCCUGAGAUUCUUACUACUGAUGAGAACAUUAUCUGCAUAUGCCAAAAAAUUUUAAGCAAAUGAAAGCUACCAAUUUAAAGUUACGGAAUCUACCAUUUUAAAGUUAAUUGCUUGUCAAGCUAUAACCACAAAAAUAAUGAAUUGAUGAGAAAUACAAUGAAGAGGCAAUGUCCAUCUCAAAAUACUGCUUUUACAAAAGCAGAAUAAAAGCGAAAAGAAAUGAAAAUGUUACACUACAUUAAUCCUGGAAUAAAAGAAGCCGAAAUAAAUGAGAGAUGAGUUGGGAUCAAGUGGAUUGAGGAGGCUGUGCUGUGUGCCAAUGUUUCGUUUGCCUCAGACAGGUAUCUCUUCGUUAUCAGAAGAGUUGCUUCAUUUCAUCUGGGAGCAGAAAACAGCAGGCAGCUGUUAACAGAUAAGUUUAACUUGCAUCUGCAGUAUUGCAUGUUAGGGAUAAGUGCUUAUUUUUAAGAGCUGUGGAGUUCUUAAAUAUCAACCAUGGCACUUUCUCCUGACCCCUUCCCUAGGGGAUUUCAGGAUUGAGAAAUUUUUCCAUCGAGCCUUUUUAAAAUUGUAGGACUUGUUCCUGUGGGCUUCAGUGAUGGGAUAGUACACUUCACUCAGAGGCAUUUGCAUCUUUAAAUAAUUUCUUAAAAGCCUCUAAAGUGAUCAGUGCCUUGAUGCCAACUAAGGAAAUUUGUUUAGCAUUGAAUCUCUGAAGGCUCUAUGAAAGGAAUAGCAUGAUGUGCUGUUAGAAUCAGAUGUUACUGCUAAAAUUUACAUGUUGUGAUGUAAAUUGUGUAGAAAACCAUUAAAUCAUUCAAAAUAAUAAACUAUUUUUAUUAGAGAAUGUAUACUUUUAGAAAGCUGUCUCCUUAUUUAAAUAAAAUAGUGUUUGUCUGUAGUUCAGUGUUGGGGCAAUCUUGGGGGGGAUUCUUCUCUAAUCUUUCAGAAACUUUGUCUGCGAACACUCUUUAAUGGACCAGAUCAGGAUUUGAGCGGAAGAACGAAUGUAACUUUAAGGCAGGAAAGACAAAUUUUAUUCUUCAUAAAGUGAUGAGCAUAUAAUAAUUCCAGGCACAUGGCAAUAGAGGCCCUCUAAAUAAGGAAUAAAUAACCUCUUAGACAGGUGGGAGAUUAUGAUCAGAGUAAAAGGUAAUUACACAUUUUAUUUCCAGAAAGUCAGGGGUCUAUAAAUUGACAGUGAUUAGAGUAAUACUUUUUCACAUUUCCAAAGUUUGCAUGUUAACUUUAAAUGCUUACAAUCUUAGAGUGGUAGGCAAUGUUUUACACUAUUGACCUUAUAUAGGGAAGGGAGGGGGUGCCUGUGGGGUUUUAAAGAAUUUUCCUUUGCAGAGGCAUUUCAUCCUUCAUGAAGCCAUUCAGGAUUUUGAAUUGCAUAUGAGUGCUUGGCUCUUCCUUCUGUUCUAGUGAGUGUAUGAGACCUUGCAGUGAGUUUAUCAGCAUACUCAAAAUUUUUUUCCUGGAAUUUGGAGGGAUGGGAGGAGGGGGUGGGGCUUACUUGUUGUAGCUUUUUUUUUUUUUACAGACUUCACAGAGAAUGCAGUUGUCUUGACUUCAGGUCUGUCUGUUCUGUUGGCAAGUAAAUGCAGUACUGUUCUGAUCCCGCUGCUAUUAGAAUGCAUUGUGAAACGACUGGAGUAUGAUUAAAAGUUGUGUUCCCCAAUGCUUGGAGUAGUGAUUGUUGAAGGAAAAAAUCCAGCUGAGUGAUAAAGGCUGAGUGUUGAGGAAAUUUCUGCAGUUUUAAGCAGUCGUAUUUGUGAUUGAAGCUGAGUACAUUUUGCUGGUGUAUUUUUAGGUAAAAUGCUUUUUGUUCAUUUCUGGUGGUGGGAGGGGACUGAAGCCUUUAGUCUUUUCCAGAUGCAACCUUAAAAUCAGUGACAAGAAACAUUCCAAACAAGCAACAGUCUUCAAGAAAUUAAACUGGCAAGUGGAAAUGUUUAAACAGUUCAGUGAUCUUUAGUGCAUUGUUUAUGUGUGGGUUUCUCUCUCCCCUCCCUUGGUCUUAAUUCUUACAUGCAGGAACACUCAGCAGACACACGUAUGCGAAGGGCCAGAGAAGCCAGACCCAGUAAGAAAAAAUAGCCUAUUUACUUUAAAUAAACCAAACAUUCCAUUUUAAAUGUGGGGAUUGGGAACCACUAGUUCUUUCAGAUGGUAUUCUUCAGACUAUAGAAGGAGCUUCCAGUUGAAUUCACCAGUGGACAAAAUGAGGAAAACAGGUGAACAAGCUUUUUCUGUAUUUACAUACAAAGUCAGAUCAGUUAUGGGACAAUAGUAUUGAAUAGAUUUCAGCUUUAUGCUGGAGUAACUGGCAUGUGAGCAAACUGUGUUGGCGUGGGGGUGGAGGGGUGAGGUGGGCGCUAAGCCUUUUUUUAAGAUUUUUCAGGUACCCCUCACUAAAGGCACCGAAGGCUUAAAGUAGGACAACCAUGGAGCCUUCCUGUGGCAGGAGAGACAACAAAGCGCUAUUAUCCUAAGGUCAAGAGAAGUGUCAGCCUCACCUGAUUUUUAUUAGUAAUGAGGACUUGCCUCAACUCCCUCUUUCUGGAGUGAAGCAUCCGAAGGAAUGCUUGAAGUACCCCUGGGCUUCUCUUAACAUUUAAGCAAGCUGUUUUUAUAGCAGCUCUUAAUAAUAAAGCCCAAAUCUCAAGCGGUGCUUGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCACUUUUCCCUAGCUUUUCCAGAAGCCUGUUAAAAGCAAGGUCUCCCCACAAGCAACUUCUCUGCCACAUCGCCACCCCGUGCCUUUUGAUCUAGCACAGACCCUUCACCCCUCACCUCGAUGCAGCCAGUAGCUUGGAUCCUUGUGGGCAUGAUCCAUAAUCGGUUUCAAGGUAACGAUGGUGUCGAGGUCUUUGGUGGGUUGAACUAUGUUAGAAAAGGCCAUUAAUUUGCCUGCAAAUUGUUAACAGAAGGGUAUUAAAACCACAGCUAAGUAGCUCUAUUAUAAUACUUAUCCAGUGACUAAAACCAACUUAAACCAGUAAGUGGAGAAAUAACAUGUUCAAGAACUGUAAUGCUGGGUGGGAACAUGUAACUUGUAGACUGGAGAAGAUAGGCAUUUGAGUGGCUGAGAGGGCUUUUGGGUGGGAAUGCAAAAAUUCUCUGCUAAGACUUUUUCAGGUGAACAUAACAGACUUGGCCAAGCUAGCAUCUUAGCGGAAGCUGAUCUCCAAUGCUCUUCAGUAGGGUCAUGAAGGUUUUUCUUUUCCUGAGAAAACAACACGUAUUGUUUUCUCAGGUUUUGCUUUUUGGCCUUUUUCUAGCUUAAAAAAAAAAAAAGCAAAAGAUGCUGGUGGUUGGCACUCCUGGUUUCCAGGACGGGGUUCAAAUCCCUGCGGUGUCUUUGCUUUGACUACUAAUCUGUCUUCAGGACUCUUUCUGUAUUUCUCCUUUUCUCUGCAGGUGCUAGUUCUUGGAGUUUUGGGGAGGUGGGAGGUAACAGCACAAUAUCUUUGAACUAUAUACAUCCUUGAUGUAUAAUUUGUCAGGAGCUUGACUUGAUUGUAUAUUCAUAUUUACACGAGAACCUAAUAUAACUGCCUUGUCUUUUUCAGGUAAUAGCCUGCAGCUGGUGUUUUGAGAAGCCCUACUGCUGAAAACUUAACAAUUUUGUGUAAUAAAAAUGGAGAAGCUCUAAAUUGUUGUGGUUCUUUUGGAAUAAAAAAAUCUUGAUUGGGAAAAAAGAUGGGUGUUCUGUGGGCUUGUUCUGUUAAAUCUGUGGUCUAUAAACACAGCACCCAUAAUUACAGCAUAAUCUUCAAGUAGGGUACGGACUUUGGGGGAUUGGUGCGAGGGUAGUGGGUGAGUGGCCUACUAAAAAGCCCAGUAACCCCCACAGGAAAAUAGGGAACUUCUUUUUAAGUAGCCUCCUUUCCACUAUUUAGUAAUUGGCUGUGAGCUGGGCUGGGGGAGAAAUGGGGCGGGGUGUGUGUGUCAUUGGAAAGCUCUCUUUUUUGUUUUUUUGAGACAGUCUCACUUUGUCCCCCAGGCUGGAGUGUAGUGGCAUGAUCUCUGCAAACUGCAACCUCCACUUGUGGGGUCCAAGUGGUUGUCCUGCUUCACCCUCCCUGUAGCUGGGACUACAGGUGCACACCACCACGCCUGGCUAAUUUUUGUAUU

    Taxonomic tree

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    2D structure New