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Saccharomyces cerevisiae S288C Small Nucleolar RNA secondary structure diagram

Saccharomyces cerevisiae S288C Small Nucleolar RNA URS000051C8F2_559292

Automated summary: This sRNA sequence is 89 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 4 databases (IntAct, RefSeq, SGD, ENA). Has a conserved secondary structure or a structured region. Saccharomyces cerevisiae S288C Small Nucleolar RNA sequence is a product of SNR39 gene. Found in the Saccharomyces cerevisiae S288C reference genome.

Interactions 1

According to IntAct, Saccharomyces cerevisiae S288C Small Nucleolar RNA interacts with:

Interaction id Participant Synonyms
EBI-10960957 URS00004BEF81_559292 EBI-10821555 URS00004BEF81_559292 rrna 35s yeast

Genome locations

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This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
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    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Localisation

    Sequence

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    UUUUAUGAUGAAAAUCCAUUGUAUCCCAAUACAUAUUCGACUAGUCAUUGACGAUGCUGUCGUAACUUAUCACCAUCUUUCGACUGAUU

    Taxonomic tree

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    This sequence is found in 97 other species

    1. Saccharomyces cerevisiae (baker's yeast) small nucleolar RNA snR39
    2. Saccharomyces cerevisiae EC1118 SNR39
    3. Saccharomyces cerevisiae Kyokai no. 7 K7_snR39
    4. Saccharomyces cerevisiae P301 SNR39
    5. Saccharomyces cerevisiae PE-2 SNR39
    6. Saccharomyces cerevisiae R103 SNR39
    7. Saccharomyces cerevisiae YJM1078 SNR39
    8. Saccharomyces cerevisiae YJM1083 SNR39
    9. Saccharomyces cerevisiae YJM1129 SNR39
    10. Saccharomyces cerevisiae YJM1133 SNR39
    11. Saccharomyces cerevisiae YJM1190 SNR39
    12. Saccharomyces cerevisiae YJM1199 SNR39
    13. Saccharomyces cerevisiae YJM1202 SNR39
    14. Saccharomyces cerevisiae YJM1208 SNR39
    15. Saccharomyces cerevisiae YJM1242 SNR39
    16. Saccharomyces cerevisiae YJM1244 SNR39
    17. Saccharomyces cerevisiae YJM1248 SNR39
    18. Saccharomyces cerevisiae YJM1250 SNR39
    19. Saccharomyces cerevisiae YJM1252 SNR39
    20. Saccharomyces cerevisiae YJM1273 SNR39
    21. Saccharomyces cerevisiae YJM1304 SNR39
    22. Saccharomyces cerevisiae YJM1307 SNR39
    23. Saccharomyces cerevisiae YJM1311 SNR39
    24. Saccharomyces cerevisiae YJM1326 SNR39
    25. Saccharomyces cerevisiae YJM1332 SNR39
    26. Saccharomyces cerevisiae YJM1336 SNR39
    27. Saccharomyces cerevisiae YJM1338 SNR39
    28. Saccharomyces cerevisiae YJM1341 SNR39
    29. Saccharomyces cerevisiae YJM1342 SNR39
    30. Saccharomyces cerevisiae YJM1355 SNR39
    31. Saccharomyces cerevisiae YJM1356 SNR39
    32. Saccharomyces cerevisiae YJM1381 SNR39
    33. Saccharomyces cerevisiae YJM1383 SNR39
    34. Saccharomyces cerevisiae YJM1385 SNR39
    35. Saccharomyces cerevisiae YJM1386 SNR39
    36. Saccharomyces cerevisiae YJM1387 SNR39
    37. Saccharomyces cerevisiae YJM1388 SNR39
    38. Saccharomyces cerevisiae YJM1389 SNR39
    39. Saccharomyces cerevisiae YJM1399 SNR39
    40. Saccharomyces cerevisiae YJM1401 SNR39
    41. Saccharomyces cerevisiae YJM1402 SNR39
    42. Saccharomyces cerevisiae YJM1415 SNR39
    43. Saccharomyces cerevisiae YJM1417 SNR39
    44. Saccharomyces cerevisiae YJM1418 SNR39
    45. Saccharomyces cerevisiae YJM1419 SNR39
    46. Saccharomyces cerevisiae YJM1433 SNR39
    47. Saccharomyces cerevisiae YJM1434 SNR39
    48. Saccharomyces cerevisiae YJM1439 SNR39
    49. Saccharomyces cerevisiae YJM1443 SNR39
    50. Saccharomyces cerevisiae YJM1444 SNR39
    51. Saccharomyces cerevisiae YJM1447 SNR39
    52. Saccharomyces cerevisiae YJM1450 SNR39
    53. Saccharomyces cerevisiae YJM1460 SNR39
    54. Saccharomyces cerevisiae YJM1463 SNR39
    55. Saccharomyces cerevisiae YJM1477 SNR39
    56. Saccharomyces cerevisiae YJM1478 SNR39
    57. Saccharomyces cerevisiae YJM1526 SNR39
    58. Saccharomyces cerevisiae YJM1527 SNR39
    59. Saccharomyces cerevisiae YJM1549 SNR39
    60. Saccharomyces cerevisiae YJM1573 SNR39
    61. Saccharomyces cerevisiae YJM1574 SNR39
    62. Saccharomyces cerevisiae YJM1592 SNR39
    63. Saccharomyces cerevisiae YJM1615 SNR39
    64. Saccharomyces cerevisiae YJM189 SNR39
    65. Saccharomyces cerevisiae YJM193 SNR39
    66. Saccharomyces cerevisiae YJM195 SNR39
    67. Saccharomyces cerevisiae YJM244 SNR39
    68. Saccharomyces cerevisiae YJM248 SNR39
    69. Saccharomyces cerevisiae YJM270 SNR39
    70. Saccharomyces cerevisiae YJM271 SNR39
    71. Saccharomyces cerevisiae YJM320 SNR39
    72. Saccharomyces cerevisiae YJM326 SNR39
    73. Saccharomyces cerevisiae YJM428 SNR39
    74. Saccharomyces cerevisiae YJM450 SNR39
    75. Saccharomyces cerevisiae YJM451 SNR39
    76. Saccharomyces cerevisiae YJM453 SNR39
    77. Saccharomyces cerevisiae YJM456 SNR39
    78. Saccharomyces cerevisiae YJM470 SNR39
    79. Saccharomyces cerevisiae YJM541 SNR39
    80. Saccharomyces cerevisiae YJM554 SNR39
    81. Saccharomyces cerevisiae YJM555 SNR39
    82. Saccharomyces cerevisiae YJM627 SNR39
    83. Saccharomyces cerevisiae YJM681 SNR39
    84. Saccharomyces cerevisiae YJM682 SNR39
    85. Saccharomyces cerevisiae YJM683 SNR39
    86. Saccharomyces cerevisiae YJM689 SNR39
    87. Saccharomyces cerevisiae YJM693 SNR39
    88. Saccharomyces cerevisiae YJM969 SNR39
    89. Saccharomyces cerevisiae YJM972 SNR39
    90. Saccharomyces cerevisiae YJM975 SNR39
    91. Saccharomyces cerevisiae YJM978 SNR39
    92. Saccharomyces cerevisiae YJM981 SNR39
    93. Saccharomyces cerevisiae YJM984 SNR39
    94. Saccharomyces cerevisiae YJM987 SNR39
    95. Saccharomyces cerevisiae YJM990 SNR39
    96. Saccharomyces cerevisiae YJM993 SNR39
    97. Saccharomyces cerevisiae YJM996 SNR39
    2D structure Publications