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Pelobacter carbinolicus DSM 2380 16S ribosomal RNA secondary structure diagram

Pelobacter carbinolicus DSM 2380 16S ribosomal RNA URS0000434740_338963

Automated summary: This rRNA sequence is 1,558 nucleotides long and is found in Pelobacter carbinolicus DSM 2380. Annotated by 5 databases (RefSeq, Rfam, RDP, ENA, SILVA). Described in 6 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Pelobacter carbinolicus DSM 2380 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    UAACUGGAGAGUUUGAUCCUGGCUCAGAACGAACGCUGGCGGCGUGCUUAACACAUGCAAGUCGAACGCGAAAGUUUCCUUCGGGAAGCGAGUAGAGUGGCGCACGGGUGAGUAACACGUGGAUAAUCUGCCCGAUGACCUGGGAUAACACUUCGAAAGAGGUGCUAAUACCGGAUAAGCCCACAGGCUCUUCGGAGCAUGCGGGAAAAGGUGGGGACCUUCGGGCCUACCGUCAUCGGAUGAGUCCGCGGCCCAUUAGCUAGUUGGUGGGGUAACGGCCCACCAAGGCGACGAUGGGUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGCGCAAUGGGGGAAACCCUGACGCAGCAACGCCGCGUGAGUGAUGAAGGCUUUCGGGUCGUAAAGCUCUGUCAGAGGGGAAGAAACUAUCGUGGUCGAAUAGGCCCCGGUACUGACGGUACCCUCAAAGGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUGUUCGGAAUUAUUGGGCGUAAAGCGCGUGUAGGCGGUCUGUUAAGUCUGAUGUGAAAGCCCCGGGCUCAACCCGGGAAGUGCAUUGGAUACUGGCAGACUUGAGUACGGGAGAGGAAAGUGGAAUUCCGAGUGUAGGGGUGAAAUCCGUAGAUAUUCGGAGGAACACCGGUGGCGAAGGCGGCUUUCUGGACCGAUACUGACGCUGAGACGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGGGUACUAGGUGUCGCGGGUAUUGACCCCUGCGGUGCCGAAGCUAACGCAUUAAGUACCCCGCCUGGGGAGUACGGCCGCAAGGCUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGACGCAACGCGCAGAACCUUACCUGGGCUUGACAUCCCGAUCGUACUUUCUGGAAACAGUUAGGUCAGUACGGCUGGAUCGGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCCUUAGUUGCCAGCAUUCAGUUGGGCACUCUAAGGAGACUGCCGGUGUUAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGUCCAGGGCUACACACGUGCUACAAUGGCCGGUACAAAGGGCAGCGAAACCGCAAGGUUUAGCGAAUCCCAAAAAGCCGGUCUCAGUUCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGGGAGUUGAUUGUACCUGAAAUCGGUGGGCUAACCUUCGGGAGGCAGCCGCUUAUGGUAUGGUCGGUAACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUUU

    Taxonomic tree

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    This sequence is found in 0 other species

    1. Syntrophotalea carbinolica strain DSM 2380 16S ribosomal RNA, rRNA
    2D structure New