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Mus musculus (house mouse) mmu-miR-21a-5p URS000039ED8D_10090

Automated summary: This miRNA sequence is 22 nucleotides long and is found in Mus musculus. Annotated by 6 databases (RefSeq, TarBase, ENA, PirBase, LncBase, miRBase). Mus musculus (house mouse) mmu-miR-21a-5p sequence is a product of 21, miR-21a, mmu-miR-21a, miR-21a-5p, miR-21, Mir21a, mmu-miR-21a-5p genes. Found in the house mouse reference genome. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 0610006G08Rik, 0610006H10Rik, 0610007D13Rik, 0610010B06Rik, 0610010C24Rik, 0610010G05Rik, 0610010I05Rik, 0610010I23Rik, 0610010M09Rik, 0610010M22Rik.

Interactions 23

According to PSICQUIC, Mus musculus (house mouse) mmu-miR-21a-5p interacts with:

Interaction id Participant Synonyms
URS000039ED8D_10090-12 A0A0R4J097 A0A0R4J097
URS000039ED8D_10090-14 A0A0R4J097 A0A0R4J097
URS000039ED8D_10090-1 O08586 O08586
URS000039ED8D_10090-0 O08586 O08586
URS000039ED8D_10090-3 O35253 O35253
URS000039ED8D_10090-15 O35253 O35253
URS000039ED8D_10090-16 O35253 O35253
URS000039ED8D_10090-2 O35253 O35253
URS000039ED8D_10090-13 P23204 P23204
URS000039ED8D_10090-4 P41047 P41047
URS000039ED8D_10090-17 P41047 P41047
URS000039ED8D_10090-5 P42227 P42227
URS000039ED8D_10090-18 P52927 P52927
URS000039ED8D_10090-6 P52927 P52927
URS000039ED8D_10090-19 Q61823 Q61823
URS000039ED8D_10090-7 Q61823 Q61823
URS000039ED8D_10090-8 Q61823 Q61823
URS000039ED8D_10090-20 Q9QXV8 Q9QXV8
URS000039ED8D_10090-9 Q9QXV8 Q9QXV8
URS000039ED8D_10090-10 Q9QXV9 Q9QXV9
URS000039ED8D_10090-21 Q9QXV9 Q9QXV9
URS000039ED8D_10090-11 Q9Z0J1 Q9Z0J1
URS000039ED8D_10090-22 Q9Z0J1 Q9Z0J1

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations


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    Taxonomic tree

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    This sequence is found in 28 other species

    1. Anolis carolinensis (green anole) aca-miR-21-5p
    2. Ateles geoffroyi age-miR-21
    3. Bos taurus microRNA miR-21
    4. Callithrix jacchus cja-miR-21
    5. Canis lupus familiaris (dog) cfa-miR-21
    6. Capra hircus miR-21
    7. Chrysemys picta cpi-miR-21-5p
    8. Columba livia (rock pigeon) cli-miR-21-5p
    9. Cricetulus griseus (Chinese hamster) cgr-miR-21-5p
    10. Equus caballus eca-miR-21
    11. Gallus gallus gga-miR-21-5p
    12. Gorilla gorilla ggo-miR-21
    13. Homo sapiens (human) hsa-miR-21-5p
    14. Macaca mulatta (Rhesus monkey) mml-miR-21-5p
    15. Macaca nemestrina (pig-tailed macaque) mne-miR-21
    16. Monodelphis domestica mdo-miR-21-5p
    17. Ophiophagus hannah oha-miR-21-5p
    18. Ornithorhynchus anatinus oan-miR-21-5p
    19. Ovis aries microRNA miR-21
    20. Pan paniscus ppa-miR-21
    21. Pan troglodytes ptr-miR-21
    22. Pongo pygmaeus ppy-miR-21
    23. Pteropus alecto (black flying fox) pal-miR-21-5p
    24. Rattus norvegicus (Norway rat) rno-miR-21-5p
    25. Sus scrofa (pig) ssc-miR-21-5p
    26. Taeniopygia guttata (zebra finch) tgu-miR-21-5p
    27. Tupaia chinensis tch-miR-21-5p
    28. Xenopus tropicalis Xenopus_tropicalis piRNA piR-xtr-2544792
    Publications New