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Saccharomyces cerevisiae S288C Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis secondary structure diagram

Saccharomyces cerevisiae S288C Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis URS000037F6D3_559292

Automated summary: This ncRNA sequence is 73 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 4 databases (Rfam, SGD, IntAct, ENA). Described in 53 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (tRNA, RF00005). Saccharomyces cerevisiae S288C Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis sequence is a product of tRNA-Thr-AGT-1-9, tRNA-Thr-AGT-1-10, tRNA-Thr-AGT-1-1, tRNA-Thr-AGT-1-2, tRNA-Thr-AGT-1-3, tRNA-Thr-AGT-1-8, tRNA-Thr-AGT-1-11, tRNA-Thr-AGT-1-7, tRNA-Thr-AGT-1-4, tRNA-Thr-AGT-1-5, tRNA-Thr-AGT-1-6 genes. Found in the Saccharomyces cerevisiae S288C reference genome.

Interactions 4

According to IntAct, Saccharomyces cerevisiae S288C Threonine tRNA (tRNA-Thr), predicted by tRNAscan-SE analysis interacts with:

IntAct ID Participant Synonyms
EBI-12518730 Q08641 ABP140 Actin-binding protein of 140 kDa D6W2U2 EBI-2044 Q08641 Q08644 TRM140 YOR239W YOR240W ab140_yeast tRNA methyltransferase of 140 kDa
EBI-12520281 Q08641 ABP140 Actin-binding protein of 140 kDa D6W2U2 EBI-2044 Q08641 Q08644 TRM140 YOR239W YOR240W ab140_yeast tRNA methyltransferase of 140 kDa
EBI-12520342 Q08641 ABP140 Actin-binding protein of 140 kDa D6W2U2 EBI-2044 Q08641 Q08644 TRM140 YOR239W YOR240W ab140_yeast tRNA methyltransferase of 140 kDa
EBI-12520384 Q08641 ABP140 Actin-binding protein of 140 kDa D6W2U2 EBI-2044 Q08641 Q08644 TRM140 YOR239W YOR240W ab140_yeast tRNA methyltransferase of 140 kDa

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

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    GCUUCUAUGGCCAAGUUGGUAAGGCGCCACACUAGUAAUGUGGAGAUCAUCGGUUCAAAUCCGAUUGGAAGCA

    Taxonomic tree

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    This sequence is found in 113 other species

    1. Naumovozyma dairenensis CBS 421 tRNA
    2. Saccharomyces cerevisiae AWRI796 tRNA
    3. Saccharomyces cerevisiae (baker's yeast) tT(AGT)NL1 - systematic name
    4. Saccharomyces cerevisiae EC1118 tRNA-Thr
    5. Saccharomyces cerevisiae FostersB tRNA
    6. Saccharomyces cerevisiae FostersO tRNA
    7. Saccharomyces cerevisiae Kyokai no. 7 tRNA-Thr
    8. Saccharomyces cerevisiae Lalvin QA23 tRNA
    9. Saccharomyces cerevisiae P283 tRNA-Thr
    10. Saccharomyces cerevisiae P301 tRNA-Thr
    11. Saccharomyces cerevisiae PE-2 tRNA-Thr
    12. Saccharomyces cerevisiae R008 tRNA-Thr
    13. Saccharomyces cerevisiae R103 tRNA-Thr
    14. Saccharomyces cerevisiae RM11-1a tRNA-Thr
    15. Saccharomyces cerevisiae Vin13 tRNA
    16. Saccharomyces cerevisiae VL3 tRNA
    17. Saccharomyces cerevisiae YJM1078 tRNA-Thr
    18. Saccharomyces cerevisiae YJM1083 tRNA-Thr
    19. Saccharomyces cerevisiae YJM1129 tRNA-Thr
    20. Saccharomyces cerevisiae YJM1133 tRNA-Thr
    21. Saccharomyces cerevisiae YJM1190 tRNA-Thr
    22. Saccharomyces cerevisiae YJM1199 tRNA-Thr
    23. Saccharomyces cerevisiae YJM1202 tRNA-Thr
    24. Saccharomyces cerevisiae YJM1208 tRNA-Thr
    25. Saccharomyces cerevisiae YJM1242 tRNA-Thr
    26. Saccharomyces cerevisiae YJM1244 tRNA-Thr
    27. Saccharomyces cerevisiae YJM1248 tRNA-Thr
    28. Saccharomyces cerevisiae YJM1250 tRNA-Thr
    29. Saccharomyces cerevisiae YJM1252 tRNA-Thr
    30. Saccharomyces cerevisiae YJM1273 tRNA-Thr
    31. Saccharomyces cerevisiae YJM1304 tRNA-Thr
    32. Saccharomyces cerevisiae YJM1307 tRNA-Thr
    33. Saccharomyces cerevisiae YJM1311 tRNA-Thr
    34. Saccharomyces cerevisiae YJM1326 tRNA-Thr
    35. Saccharomyces cerevisiae YJM1332 tRNA-Thr
    36. Saccharomyces cerevisiae YJM1336 tRNA-Thr
    37. Saccharomyces cerevisiae YJM1338 tRNA-Thr
    38. Saccharomyces cerevisiae YJM1341 tRNA-Thr
    39. Saccharomyces cerevisiae YJM1342 tRNA-Thr
    40. Saccharomyces cerevisiae YJM1355 tRNA-Thr
    41. Saccharomyces cerevisiae YJM1356 tRNA-Thr
    42. Saccharomyces cerevisiae YJM1381 tRNA-Thr
    43. Saccharomyces cerevisiae YJM1383 tRNA-Thr
    44. Saccharomyces cerevisiae YJM1385 tRNA-Thr
    45. Saccharomyces cerevisiae YJM1386 tRNA-Thr
    46. Saccharomyces cerevisiae YJM1387 tRNA-Thr
    47. Saccharomyces cerevisiae YJM1388 tRNA-Thr
    48. Saccharomyces cerevisiae YJM1389 tRNA-Thr
    49. Saccharomyces cerevisiae YJM1399 tRNA-Thr
    50. Saccharomyces cerevisiae YJM1400 tRNA-Thr
    51. Saccharomyces cerevisiae YJM1401 tRNA-Thr
    52. Saccharomyces cerevisiae YJM1402 tRNA-Thr
    53. Saccharomyces cerevisiae YJM1415 tRNA-Thr
    54. Saccharomyces cerevisiae YJM1417 tRNA-Thr
    55. Saccharomyces cerevisiae YJM1418 tRNA-Thr
    56. Saccharomyces cerevisiae YJM1419 tRNA-Thr
    57. Saccharomyces cerevisiae YJM1433 tRNA-Thr
    58. Saccharomyces cerevisiae YJM1434 tRNA-Thr
    59. Saccharomyces cerevisiae YJM1439 tRNA-Thr
    60. Saccharomyces cerevisiae YJM1443 tRNA-Thr
    61. Saccharomyces cerevisiae YJM1444 tRNA-Thr
    62. Saccharomyces cerevisiae YJM1447 tRNA-Thr
    63. Saccharomyces cerevisiae YJM1450 tRNA-Thr
    64. Saccharomyces cerevisiae YJM1460 tRNA-Thr
    65. Saccharomyces cerevisiae YJM1463 tRNA-Thr
    66. Saccharomyces cerevisiae YJM1477 tRNA-Thr
    67. Saccharomyces cerevisiae YJM1478 tRNA-Thr
    68. Saccharomyces cerevisiae YJM1479 tRNA-Thr
    69. Saccharomyces cerevisiae YJM1526 tRNA-Thr
    70. Saccharomyces cerevisiae YJM1527 tRNA-Thr
    71. Saccharomyces cerevisiae YJM1549 tRNA-Thr
    72. Saccharomyces cerevisiae YJM1573 tRNA-Thr
    73. Saccharomyces cerevisiae YJM1574 tRNA-Thr
    74. Saccharomyces cerevisiae YJM1592 tRNA-Thr
    75. Saccharomyces cerevisiae YJM1615 tRNA-Thr
    76. Saccharomyces cerevisiae YJM189 tRNA-Thr
    77. Saccharomyces cerevisiae YJM193 tRNA-Thr
    78. Saccharomyces cerevisiae YJM195 tRNA-Thr
    79. Saccharomyces cerevisiae YJM244 tRNA-Thr
    80. Saccharomyces cerevisiae YJM248 tRNA-Thr
    81. Saccharomyces cerevisiae YJM270 tRNA-Thr
    82. Saccharomyces cerevisiae YJM271 tRNA-Thr
    83. Saccharomyces cerevisiae YJM320 tRNA-Thr
    84. Saccharomyces cerevisiae YJM326 tRNA-Thr
    85. Saccharomyces cerevisiae YJM428 tRNA-Thr
    86. Saccharomyces cerevisiae YJM450 tRNA-Thr
    87. Saccharomyces cerevisiae YJM451 tRNA-Thr
    88. Saccharomyces cerevisiae YJM453 tRNA-Thr
    89. Saccharomyces cerevisiae YJM456 tRNA-Thr
    90. Saccharomyces cerevisiae YJM470 tRNA-Thr
    91. Saccharomyces cerevisiae YJM541 tRNA-Thr
    92. Saccharomyces cerevisiae YJM554 tRNA-Thr
    93. Saccharomyces cerevisiae YJM555 tRNA-Thr
    94. Saccharomyces cerevisiae YJM627 tRNA-Thr
    95. Saccharomyces cerevisiae YJM681 tRNA-Thr
    96. Saccharomyces cerevisiae YJM682 tRNA-Thr
    97. Saccharomyces cerevisiae YJM683 tRNA-Thr
    98. Saccharomyces cerevisiae YJM689 tRNA-Thr
    99. Saccharomyces cerevisiae YJM693 tRNA-Thr
    100. Saccharomyces cerevisiae YJM969 tRNA-Thr
    101. Saccharomyces cerevisiae YJM972 tRNA-Thr
    102. Saccharomyces cerevisiae YJM975 tRNA-Thr
    103. Saccharomyces cerevisiae YJM978 tRNA-Thr
    104. Saccharomyces cerevisiae YJM981 tRNA-Thr
    105. Saccharomyces cerevisiae YJM984 tRNA-Thr
    106. Saccharomyces cerevisiae YJM987 tRNA-Thr
    107. Saccharomyces cerevisiae YJM990 tRNA-Thr
    108. Saccharomyces cerevisiae YJM993 tRNA-Thr
    109. Saccharomyces cerevisiae YJM996 tRNA-Thr
    110. Saccharomyces kudriavzevii IFO 1802 tRNA
    111. Saccharomyces pastorianus tRNA-Thr
    112. Zygosaccharomyces bailii ISA1307 transfer RNA-Thr(AGT)
    113. Zygosaccharomyces bailii transfer RNA-Thr(AGT)
    114. Zygosaccharomyces parabailii tRNA-Thr
    2D structure New