v26

Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.
Escherichia coli UTI89 bacterial SSU rRNA secondary structure diagram

Escherichia coli UTI89 bacterial SSU rRNA URS000036C8BF_364106

Genome locations

Gene Ontology annotations

Sequence

Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

Search for similar sequences 
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAACGGUAACAGGAAGCAGCUUGCUGCUUUGCUGACGAGUGGCGGACGGGUGAGUAAUGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAUAACGUCGCAAGACCAAAGAGGGGGACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUGGGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGAGGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCUUCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUUGACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCAGAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUCGUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACCGGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCCCUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAGAAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGAAAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGCCGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUCAUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCGACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGUAGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAACAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUUA

Taxonomic tree

View annotations in different species by clicking on species names.

Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

This sequence is found in 29 other species

  1. Escherichia coli 16S ribosomal RNA from Escherichia coli (PDB 6ZTJ, chain AA)
  2. Escherichia albertii 16S ribosomal RNA
  3. Escherichia coli 1.2741 bacterial SSU rRNA
  4. Escherichia coli 9.1649 bacterial SSU rRNA
  5. Escherichia coli 97.0259 bacterial SSU rRNA
  6. Escherichia coli ISC41 SSU rRNA
  7. Escherichia coli JJ1886 bacterial SSU rRNA
  8. Escherichia coli NA114 16S ribosomal RNA
  9. Escherichia coli O127:H6 bacterial SSU rRNA
  10. Escherichia coli O127:H6 str. E2348/69 Bacterial small subunit ribosomal RNA
  11. Escherichia coli O145:H28 16S ribosomal RNA
  12. Escherichia coli O18ac:H14 16S ribosomal RNA
  13. Escherichia coli O25b:H4 bacterial SSU rRNA
  14. Escherichia coli O25b:H4-ST131 16S ribosomal RNA
  15. Escherichia coli O25:H4 16S ribosomal RNA
  16. unidentified 16S ribosomal RNA
  17. Escherichia coli O7:H7 16S ribosomal RNA
  18. Escherichia coli O83:H7 16S ribosomal RNA
  19. Escherichia coli PMV-1 16S ribosomal RNA
  20. Escherichia coli SE15 bacterial SSU rRNA
  21. Escherichia coli TW07793 bacterial SSU rRNA
  22. Escherichia coli UM146 16S ribosomal RNA
  23. Escherichia fergusonii 16S ribosomal RNA
  24. Pseudomonas aeruginosa 16S ribosomal RNA
  25. Shigella boydii bacterial SSU rRNA
  26. Shigella dysenteriae bacterial SSU rRNA
  27. Shigella sp. PIB 16S ribosomal RNA
  28. Staphylococcus aureus 16S ribosomal RNA
  29. Streptomyces flavalbus 16S ribosomal RNA
 Relationships

Molecular Relationships

 2D structure

Loading 2D structure...