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Saccharomyces cerevisiae S288C TeLomerase Component URS0000348061_559292

Automated summary: This telomerase RNA sequence is 1,301 nucleotides long and is found in Saccharomyces cerevisiae S288C. Annotated by 4 databases (ENA, RefSeq, SGD, IntAct). Described in 315 papers. Matches 1 Rfam family (Sacc_telomerase, RF01050). Saccharomyces cerevisiae S288C TeLomerase Component sequence is a product of TLC1 gene. Found in the Saccharomyces cerevisiae S288C reference genome.

Interactions 10

According to IntAct, Saccharomyces cerevisiae S288C TeLomerase Component interacts with:

Interaction id Participant Synonyms
EBI-11179539 P17214 D6VYN3 EBI-6684 EST1 Ever shorter telomeres protein 1 L8083.15 P17214 Q05997 YLR233C est1_yeast
EBI-11179552 P17214 D6VYN3 EBI-6684 EST1 Ever shorter telomeres protein 1 L8083.15 P17214 Q05997 YLR233C est1_yeast
EBI-11176598 P17214 D6VYN3 EBI-6684 EST1 Ever shorter telomeres protein 1 L8083.15 P17214 Q05997 YLR233C est1_yeast
EBI-11360546 P20449 D6W2B2 DBP5 DEAD box protein 5 EBI-5617 Helicase CA5/6 P20449 RAT8 Ribonucleic acid-trafficking protein 8 YOR046C dbp5_yeast
EBI-11360525 P30822 CRM1 Chromosome region maintenance protein 1 D6VV01 EBI-20589 G8514 KAP124 Karyopherin-124 P30822 XPO1 YGR218W xpo1_yeast
EBI-2213520 P32797 CDC13 D6VRD4 EBI-4187 P32797 Q07650 YDL220C cdc13_yeast
EBI-16746998 P53617 D6W0U2 EBI-12228 N0868 NRD1 P53617 YNL251C nrd1_yeast
EBI-11360555 Q06163 D6VYW1 EBI-3764464 EST2 L8543.12 Q06163 Telomerase catalytic subunit YLR318W tert_yeast
EBI-11360531 Q06163 D6VYW1 EBI-3764464 EST2 L8543.12 Q06163 Telomerase catalytic subunit YLR318W tert_yeast
EBI-11360537 Q99257 D6W3J9 EBI-11642 MEX67 P2520 Q99257 YPL169C mex67_yeast

Genome locations

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AAUAAAACUAGAGAGGAAGAUAGGUACCCUAUGAAAAUGUCAAUGGCUGUUGCGUUUGCUUAAUCGUAUUUUUUUUUUUUUCAGUCCGUGUUUUUUGUACAUUCUACGUUUGAGUUUUCCAUCAUGCAGGCCUCAGAAAUUUGGUAGGCACUCGAUGGUGAAGAGAUAGUGUCGGAUUUCGGAUUGAUCUUUCAGUUGAUAGCCUGCUGCUCUUUUCUUUUCCAAAGAAUUUCGAGUAUGCUGGUGUCAGUGUAGAUGCUUGUGUGUGCGCAAUUUGUGGUUUUUUAUUGUGUUUCUACUUAUAGAUGGCUAAAAUCUGAGUUUAGAAAAUGCAAACCGUAAAUUCUUAAACACUGCUAUUGCAUUUAGUUGCUAAAGCAGUGUUUUUGAACUUAUUCCUGUUAUUCCUUCUUCGUACCGAUCCUCUUCUCGACCUAACCUUUUAAUUACCAUGGGAAGCCUACCAUCACCACACCCACACACAAAUGUUACAGCUAAUUGUUUAUUAGCAAAGUUUGCACGAGUUCGCUGUUUAUUUUUUUCUCGUUUUCUUAUACCUAGUAUUUUUUCUGACACUGUUUAAGGUGACAGAAAAAAAGGAGUUUAAGUUAGAUUUGCAAACAGACGGUGCUAAGCGCUGUCACUUUAUGUCUAUCUUAUCGUUAACUCUGGAAAAAGAAAAAGGAAAAAGAACGUCAGGGAACAUGAGUAUAUAUAGAAAUGGUUUAUUCUAGUUUUUUCCGUUUUUUCAGUAGAUUUUUGCCUUUAAAAGAAUAAAUCCCACUACAAAAAGGUAAAAUAAAAAAUCUAUUCACUGAACUUACUGAUGAAAUUUCCAAAUGUGCCCCGUACAUCGAACGAUGUGACAGAGAAAAAUACGAGUAGGUAAAUAAGCCAAAAGGCAAGGGUGUCCUUUCUUAAGCAUCGGUUAGGUUUGCGGGCGAUCAGUAACUGAACAAUGACACAAGAUCAAGAACGUAAUUUGAGAUUUUUCAAGAUGGUUUUUUUAGGUAUCUAUUAAAACUACUUUGAUGAUCAAUACGGUAUUUUUGUCGCAUUAUUUUCCAAGCGGAAGGAACCGUGUGUUCAUUUUAUGAAUCUUGGUGUUGUAUUCACAGCUACUUCUCCUAAUGCCUUCGAUGCAUUUAGAUAAUUUUUGGAAACAUUUUUUUUCUUGAUGUAUAUUUUUUGUAUUGUAGAAAUCGCGCGUACUGUACUUGUAUAUCGCUUUAUAAGCGCUUUUAAUUGAUUGUUCAUGACGAGGAUAGGCGGAUAGGCGGAGGUAUGCCUCUUAAUAUUUA

    Taxonomic tree

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    This sequence is found in 23 other species

    1. Saccharomyces cerevisiae (baker's yeast) miscellaneous RNA
    2. Saccharomyces cerevisiae EC1118 TLC1
    3. Saccharomyces cerevisiae synthetic construct RNA template component of telomerase
    4. Saccharomyces cerevisiae YJM1133 TLC1
    5. Saccharomyces cerevisiae YJM1311 TLC1
    6. Saccharomyces cerevisiae YJM1326 TLC1
    7. Saccharomyces cerevisiae YJM1332 TLC1
    8. Saccharomyces cerevisiae YJM1336 TLC1
    9. Saccharomyces cerevisiae YJM1341 TLC1
    10. Saccharomyces cerevisiae YJM1415 TLC1
    11. Saccharomyces cerevisiae YJM1433 TLC1
    12. Saccharomyces cerevisiae YJM1574 TLC1
    13. Saccharomyces cerevisiae YJM320 TLC1
    14. Saccharomyces cerevisiae YJM326 TLC1
    15. Saccharomyces cerevisiae YJM541 TLC1
    16. Saccharomyces cerevisiae YJM554 TLC1
    17. Saccharomyces cerevisiae YJM682 TLC1
    18. Saccharomyces cerevisiae YJM683 TLC1
    19. Saccharomyces cerevisiae YJM969 TLC1
    20. Saccharomyces cerevisiae YJM972 TLC1
    21. Saccharomyces cerevisiae YJM975 TLC1
    22. Saccharomyces cerevisiae YJM984 TLC1
    23. Saccharomyces cerevisiae YJM987 TLC1