Automated summary: This miRNA sequence is 23 nucleotides long and is found in Homo sapiens. Annotated by 10 databases (IntAct, LncBase, PSICQUIC, TarBase, MirGeneDB, RefSeq, miRBase, GeneCards, ENA, MalaCards). Homo sapiens (human) hsa-miR-221-3p sequence is a product of hsa-miR-221, MIR221, miR-221-3p, miR-221, hsa-miR-221-3p genes. Found in the human reference genome. Interacts with lncRNAs, such as (). Interacts with protein-coding genes, including 12CC4, 14-3-3GAMMA, 14-3-3γ, 2H9, 80K-L, 9G8, A-myb, A121, A170, ABCC5.
According to PSICQUIC and IntAct, Homo sapiens (human) hsa-miR-221-3p interacts with:
Interaction id | Participant | Synonyms |
---|---|---|
EBI-20560188 | intact:EBI-20560169 | EBI-20560169 ENST00000366787.7 mrna_thbs2 |
EBI-20560354 | intact:EBI-20560169 | EBI-20560169 ENST00000366787.7 mrna_thbs2 |
EBI-20564903 | intact:EBI-20564913 | EBI-20564913 ENST00000440973.5 mrna_er alfa |
EBI-25421345 | intact:EBI-25420098 | EBI-25420098 ENST00000627532 mrna_zeb2 |
URS0000170CF4_9606-0 | O14543 | O14543 |
URS0000170CF4_9606-53 | O14543 | O14543 |
URS0000170CF4_9606-54 | O14727 | O14727 |
URS0000170CF4_9606-1 | O14727 | O14727 |
URS0000170CF4_9606-55 | O15524 | O15524 |
URS0000170CF4_9606-2 | O15524 | O15524 |
URS0000170CF4_9606-3 | O43524 | O43524 |
URS0000170CF4_9606-56 | O43524 | O43524 |
URS0000170CF4_9606-4 | O60238 | O60238 |
URS0000170CF4_9606-57 | O60238 | O60238 |
URS0000170CF4_9606-58 | O60315 | O60315 |
URS0000170CF4_9606-5 | O60315 | O60315 |
URS0000170CF4_9606-59 | O95661 | O95661 |
URS0000170CF4_9606-6 | O95661 | O95661 |
URS0000170CF4_9606-60 | O95980 | O95980 |
URS0000170CF4_9606-7 | O95980 | O95980 |
URS0000170CF4_9606-8 | P01100 | P01100 |
URS0000170CF4_9606-61 | P01100 | P01100 |
URS0000170CF4_9606-62 | P04083 | P04083 |
URS0000170CF4_9606-9 | P04083 | P04083 |
URS0000170CF4_9606-49 | P05362 | P05362 |
URS0000170CF4_9606-10 | P05362 | P05362 |
URS0000170CF4_9606-64 | P05362 | P05362 |
URS0000170CF4_9606-63 | P05362 | P05362 |
URS0000170CF4_9606-65 | P06400 | P06400 |
URS0000170CF4_9606-11 | P06400 | P06400 |
URS0000170CF4_9606-66 | P09067 | P09067 |
URS0000170CF4_9606-12 | P09067 | P09067 |
URS0000170CF4_9606-67 | P10243 | P10243 |
URS0000170CF4_9606-13 | P10243 | P10243 |
URS0000170CF4_9606-15 | P10721 | P10721 |
URS0000170CF4_9606-16 | P10721 | P10721 |
URS0000170CF4_9606-17 | P10721 | P10721 |
URS0000170CF4_9606-18 | P10721 | P10721 |
URS0000170CF4_9606-69 | P10721 | P10721 |
URS0000170CF4_9606-68 | P10721 | P10721 |
URS0000170CF4_9606-14 | P10721 | P10721 |
URS0000170CF4_9606-70 | P14921 | P14921 |
URS0000170CF4_9606-20 | P14921 | P14921 |
URS0000170CF4_9606-19 | P14921 | P14921 |
URS0000170CF4_9606-71 | P14921 | P14921 |
URS0000170CF4_9606-21 | P16144 | P16144 |
URS0000170CF4_9606-72 | P16144 | P16144 |
URS0000170CF4_9606-22 | P16455 | P16455 |
URS0000170CF4_9606-73 | P16455 | P16455 |
URS0000170CF4_9606-74 | P17302 | P17302 |
URS0000170CF4_9606-23 | P17302 | P17302 |
URS0000170CF4_9606-75 | P30291 | P30291 |
URS0000170CF4_9606-24 | P30291 | P30291 |
URS0000170CF4_9606-76 | P35625 | P35625 |
URS0000170CF4_9606-50 | P35625 | P35625 |
URS0000170CF4_9606-25 | P42229 | P42229 |
URS0000170CF4_9606-77 | P42229 | P42229 |
URS0000170CF4_9606-27 | P46527 | P46527 |
URS0000170CF4_9606-51 | P46527 | P46527 |
URS0000170CF4_9606-29 | P46527 | P46527 |
URS0000170CF4_9606-28 | P46527 | P46527 |
URS0000170CF4_9606-26 | P46527 | P46527 |
URS0000170CF4_9606-78 | P46527 | P46527 |
URS0000170CF4_9606-79 | P46527 | P46527 |
URS0000170CF4_9606-80 | P46527 | P46527 |
URS0000170CF4_9606-81 | P49711 | P49711 |
URS0000170CF4_9606-30 | P49711 | P49711 |
URS0000170CF4_9606-84 | P49918 | P49918 |
URS0000170CF4_9606-32 | P49918 | P49918 |
URS0000170CF4_9606-33 | P49918 | P49918 |
URS0000170CF4_9606-82 | P49918 | P49918 |
URS0000170CF4_9606-83 | P49918 | P49918 |
URS0000170CF4_9606-31 | P49918 | P49918 |
URS0000170CF4_9606-34 | P60484 | P60484 |
URS0000170CF4_9606-85 | P60484 | P60484 |
URS0000170CF4_9606-35 | P62820 | P62820 |
URS0000170CF4_9606-86 | P62820 | P62820 |
URS0000170CF4_9606-87 | P78536 | P78536 |
URS0000170CF4_9606-36 | P78536 | P78536 |
URS0000170CF4_9606-88 | Q00987 | Q00987 |
URS0000170CF4_9606-37 | Q00987 | Q00987 |
URS0000170CF4_9606-38 | Q06787 | Q06787 |
URS0000170CF4_9606-89 | Q06787 | Q06787 |
URS0000170CF4_9606-39 | Q13153 | Q13153 |
URS0000170CF4_9606-90 | Q13153 | Q13153 |
URS0000170CF4_9606-91 | Q5U5R9 | Q5U5R9 |
URS0000170CF4_9606-40 | Q5U5R9 | Q5U5R9 |
URS0000170CF4_9606-52 | Q96LC9 | Q96LC9 |
URS0000170CF4_9606-92 | Q96LC9 | Q96LC9 |
URS0000170CF4_9606-41 | Q9BXH1 | Q9BXH1 |
URS0000170CF4_9606-93 | Q9BXH1 | Q9BXH1 |
URS0000170CF4_9606-94 | Q9HBE4 | Q9HBE4 |
URS0000170CF4_9606-42 | Q9HBE4 | Q9HBE4 |
URS0000170CF4_9606-43 | Q9NQC7 | Q9NQC7 |
URS0000170CF4_9606-95 | Q9NQC7 | Q9NQC7 |
URS0000170CF4_9606-44 | Q9NS37 | Q9NS37 |
URS0000170CF4_9606-96 | Q9NS37 | Q9NS37 |
URS0000170CF4_9606-45 | Q9NX09 | Q9NX09 |
URS0000170CF4_9606-97 | Q9NX09 | Q9NX09 |
URS0000170CF4_9606-98 | Q9UBU2 | Q9UBU2 |
URS0000170CF4_9606-46 | Q9UBU2 | Q9UBU2 |
URS0000170CF4_9606-47 | Q9UHD2 | Q9UHD2 |
URS0000170CF4_9606-99 | Q9UHD2 | Q9UHD2 |
URS0000170CF4_9606-48 | Q9UHF7 | Q9UHF7 |
URS0000170CF4_9606-100 | Q9UHF7 | Q9UHF7 |
This sequence is found in {{ locations.length }} genome
Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
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No genome locations known | ||||||||
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{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
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