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Pseudanabaena sp. PCC 7367 23S ribosomal RNA secondary structure diagram

Pseudanabaena sp. PCC 7367 23S ribosomal RNA URS000005AC14_82654

Automated summary: This ncRNA sequence is 2,884 nucleotides long and is found in Pseudanabaena sp. PCC 7367. Annotated by 3 databases (SILVA, ENA, RefSeq). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (LSU_rRNA_bacteria, RF02541).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    UCAAGCUACUAAGGGCUUACGGUGGAUACCUAGGCACAGAGAGGCGAAGAAGGACGUGGUUACCGACGAAACGCUUCGGGGAGCUGGAAGCAAGCAUUGAUCCGAAGAUAUCCGAAUGGGGCAACCCGAUGAACGGCUAGUUGAAUCCAUAGACUAGCGCGAGCGAACCCAGCGAACUGAAACAUCUUAGUAGCUGGAGGAAGAGAAAGCAAAAGCGAUUUCCUAAGUAGCGGCGAGCGAACGGGAACCAGCCCAAACCAACUGGCAAGUCUAGUUGGGGUUGUAGGACAGUCACCAUGCAUAACGGAGAUUAGGUGAAGCGCAAGGUAAGGCGCGCCAGAGAGAGUGAGAGCCUCGUAAUCGAAAAUUGAAGUUAGCAGACUGAAUCCUGAGUAGCACGGUACACGAGAAAUUCCGUGUGAAUCCACGAGGACCACCUCGUAAGGCUAAAUACUACUCUGUGACCGAUAGAGAAGAAGUACCGCGAGGGAAAGGUGAAAAGAACCCCGAGAGGGGAGUGAAAUAGAAUAUGAAACCGUAAGCUUACAAGCAAUGGGAGGACGAUUAAGCGUCUGACCGUGUGCCUGUUGAAGAAUGAGCCGGCGACUUAUAUGCAGUGGCAGGUUAAGGCGGGAAUGCCGGAGCCAAAGCGAAAGCGAGUGUGAAGAGCGCGAUAGUCGCUGUAUAUAGACCCGAACCUGGGUGAUCUAACCAUGGGCAGGAUGAAGCUUGGGUAACACCAAGUGGAGGUCCGAACCGACCGAUGUUGAAAAAUCGGCGGAUGACCUGUGGUUAGGGGUGAAAUGCCAAUCGAACCCAGAGCUAGCUGGUUCUCCCCGAAAUAUGUUGAGGCAUAGCGGUAAUGGUUAUAGUCCAGGGGUAAAGCACUGUUUCGGUGCGGGCGGCGAGAGCUGUACCAAAUCGAGACAAACUCUGAAUACUGGAUGGACACAUUACCAGUCAGACUGUGGGGGAUAAGCUCCAUGGUCAAGAGGGAAACAGCCCAGAUCACCAGCUAAGGUCCCCAAGCCAUCGCUAAGUGGAAAAGGAGGUAGGAAUACACAGACAACCAGGAGGUUUGCCUAGAAGCAGCCACCCUUGAAAGAGUGCGUAAUAGCUCACUGGUCAAGUGUUCUUGCGCCGAAAAUGAACGGGACUAAGCGAUGCACCGAAGCUGUGGGAUUGAUAUUUCAAUCGGUAGGGGAGCGUUCUGUGAUAGUUAGAAGCGCUAGCGUGAGCAGGCGUGGACGAAGCAGAAGUGAGAAUGUCGGCUUGAGUAGCGAAAACAUUGGUGAGAAUCCAAUGCCCCGAAAACCUAAGGUUUUCUCCGCAAGGCUCGUCCACGGAGAGUUAGUCAGGGCCUAAGGCGAGGUCGAAAGGCGUAGUCGAUGGAUAAUCGGUCAAUAUUCCGAUACUGACAUUAGUUAGUGCAGAGGGACGCAGGAGGCGAGUAUCAUCCAUGUGAUGGAAUACAUGGUUCAAGCAUACGAGGUGAAGAGGUCUGGUGAAAACAGACUGAGCUGAGUUGUGAGUACGAGGGUCUACGGACUCGAAGUGAUAUAGUCAUGCUGCCAAGAAAAGCUCUGAGUACGUUAAGCUAAUGUUACCUGUACCCUAAACCGACACAGGUAGGUAGGUAGAGAAUACUAAGGGGCGCGAGAUAACUCUCUCUAAGGAACUCGGCAAAAUAGCCCCGUAACUUCGGGAGAAGGGGUGCCACUGAAAGGUGGUCGCAGUGAAAUGAUCCAAGCGACUGUUUACCAAAAACAUAGGUCUCCGCUAACUCGAAAGAGGAUGUAUGGGGGCUGACGCCUGCCCAGUGCCGGAAGGUUAAGGAAGUUGGUUAGGCGAGAGCUGAAGCUAGCGACUGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGGCGUAACGAUUUGGAUGCUGUCUCGGAGAGAGACUCGGCGAAAUAGGAAUGUCUGUGAAGAUACGGACUACUUGCACCCGGACAGAAAGACCCUAUGAAGCUUUACUAUAGCUUGGAAUUGGGUUCGGGCUUCUACUGCGCAGGAUAGGUGGGAGGCUAUGAUAUAUUCCUUGUGGGGAAUAAGGAGCCAAUGGUGAGAUACCACUCUGUAGAGGCUAGAAUUCUAACCUGUACCCUUGAAUCAGGGUAAGGGACAGUUUCAGGUGGGUAGUUUGACUGGGGCGGUCGCCUCCUAAAAGGUAACGGAGGCGCGCAAAGGUUCCCUCAGGCUGGAUGGAAAUCAGCCGCAGAGUGUAAAAGCAUAAGGGAGCUUGACUGCAAGAGCAACAACUCAAGCAGGGACGAAAGUCGGCUUUAGUGAUCCGACGGCACAGAGUGGAAUGGCCGUCGCUCAACGGAUAAAAGUUACUCUAGGGAUAACAGGCUGAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGCAACCUGGUGCGGAAGUACGUGCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGUGCAAGCGUAAGAGUAUUGAGAGGAUUCCUCCUUAGUACGAGAGGACCGGGAGGAACGCACCGCUGGUGUACCAGUUAUUGUGCCAACAGUAAACGCUGGGUAGCUAAGUGCGGAGUGGAUAACCGCUGAAAGCAUCUAAGUGGGAAGCCCACCUCAAGAUGAGUACUCUUUCUACGAAAAGUAGUUAAGGUCACGGGCAGAAUACCCGUUUGAUAGGCGGUAGGUAGAAGUGCAGUAAUGUAUGUAGCCAAGCCGUACUAAUAGACCGAGGGCUUGUCCUC

    Taxonomic tree

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    2D structure New