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Paraburkholderia oxyphila bacterial SSU rRNA secondary structure diagram

Paraburkholderia oxyphila bacterial SSU rRNA URS000003A3A1_614212

Automated summary: This rRNA sequence is 1,458 nucleotides long and is found in Paraburkholderia oxyphila. Annotated by 3 databases (ENA, SILVA, Greengenes). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Paraburkholderia oxyphila bacterial SSU rRNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 4 N  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

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    AUUGAACGCUGGCGGCAUGCCUUACACAUGCAAGUCGAACGGCAGCACGGGUGCUUGCACCUGGUGGCGAGUGGCGAACGGGUGAGUAAUACAUCGGAACAUGUCCAGUAGUGGGGGAUAGCCCGGCGAAAGCCGGAUUAAUACCGCAUACGAUCUACGGAUGAAAGCGGGGGAUCUUCGGACCUCGCGCUAUUGGGGUGGCCGAUGGCGGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCGACGAUCCGUAGCUGGUCUGAGAGGACGACCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGGACAAUGGGGGCAACCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUUGUCCGGAAAGAAAUCCUNUGGGUUAAUANCCCGNGGGGAUGACGGUACCGGAAGAAUAAGCACCGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGGUGCGAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGUGCGCAGGCGGUGAUGUAAGACCGAUGUGAAAUCCCCGGGCUUAACCUGGGAACUGCAUUGGUGACUGCAUCGCUGGAGUAUGGCAGAGGGGGGUGGAAUUCCACGUGUAGCAGUGAAAUGCGUAGAGAUGUGGAGGAACACCGAUGGCGAAGGCAGCCCCCUGGGCCAAUACUGACGCUCAUGCACGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCCUAAACGAUGUCAACUGGUUGUCGGGCCUUCAUUGGCUUGGUAACGUAGCUAACGCGUGAAGUUGACCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGACCCGCACAAGCGGUGGAUGAUGUGGAUUAAUUCGAUGCAACGCGAAAAACCUUACCUACCCUUGACAUGUACGGAANCCUGCUGAGAGGUGGGGGUGCCCGAAAGGGAGCCGUAACACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUGUCCCCAGUUGCUACGCAAGAGCACUCCGGGGAGACUGCCGGUGACAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGGGUAGGGCUUCACACGUCAUACAAUGGUCGGAACAGAGGGUUGCGAAGCCGCGAGGUGGAGCCAAUCCCAGAAAACCGAUCGUAGUCCGGAUCGCAGUCUGCAACUCGACUGCGUGAAGCUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGCGGUGAAUACGUUCCCGGGUCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUUUGCCAGAAGUGGCUAGUCUAACCGCAAGGAGGACGGUCACCACGGCAGGAUUCAUGACUGGGGUGAAG

    Taxonomic tree

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    This sequence is found in 1 other species

    1. Paraburkholderia oxyphila NBRC 105797 16S ribosomal RNA
    2D structure