Automated summary: This rRNA sequence is 1,488 nucleotides long and is found in Rickettsiella massiliensis 20B. Annotated by 2 databases (RefSeq, Greengenes). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Rickettsiella massiliensis 20B 16S ribosomal RNA sequence is a product of rrn gene.
This sequence is found in {{ locations.length }} genome
| Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
|---|---|---|---|---|---|---|---|---|
| Loading genome locations... | ||||||||
| Failed to load data from server | ||||||||
| No genome locations known | ||||||||
|
loading browser
|
{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
AUUGAACGCUGGCGGCAUGCCUAACACAUGCAAGUCGAACGGCAGCACAGUAAAGGUUUCGGCCUUUAUGGGUGGCGAGUGGCGGACGGGUGAGUAAUAGGUAGGAAUCUGUCCUAGUGACCGGGACAACCCGAGGAAACUCGGGCUAAUACCGGGCGAUAUCGAAAGAUCAAAGCAGGGGACUUUACGAAAGUAAGGCCUUGCGCACUGGGGUGAGCCUACGUCGGAUUAGCUAGUUGGUGGGGUAAAGGCCUACCAAGGCAACGAUCCGUAGCUGGUCUGAGAGGAUGAUCAGCCACAUUGGGACUGAGACACGGCCCAAACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGGGCAACCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGCCUUCGGGUUGUAAAGCACUUUAGGUGGGGAAGAAAAGUAACGGGUGAAUAAUCUGUUAUUUUGACGGUACCCGCAGAAUAAGCACCGGCUAACUCUGUGCCAGCAGCCGCGGUAAUACAGAGGGUGCGAGCGUUAAUCAGAAUGACUGGGCGUAAAGGGCGUGUAGGUGGUUGACUAGGUUUGAUGUGAAAUCCCCGGGCUUAACCUGGGAAUGGCGUCGAAAACGGGUCGACUCGAGUGAGACAGAGGGUUGUGGAAUUUCCGGUGUAGCGGUGAAAUGCGUAGAUAUCGGAAAGAACAUCAGUGGCGAAGGCGACAACCUGGGUCUUAACUGACACUGAGGCGCGAAGGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCGGUAAACGAUGAGAACUAGCUGUGAGGUGUGGGGCAUUGCUCUGCGCGACGUAGCGAAGCUAACGCGUUAAGUUCUCCGCCUGGGGAGUACGGCCGCAAGGUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAUGCAACCCGAAGAACCUUACCUACCCUUGACAUCCUUGGAAGGGCGCAGAGAUGUGCCUGUGCCGAAAGGAACCAAGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGUAACGAGCGCAACCCUUAUCCUUUGUUGCCACCAGGUCAAGCUGGGAACUUAAAGGAGACUGCCGGUGAUAAACCGGAGGAAGGUGGGGACGACGUCAAGUCAUCAUGGCCUUUAUGGGUAGGGCUACACACGUGCUACAAUGGGGCGUACAAUAGGAAGCCAACCCGCGAGGGGGAGCCAAUCCUUAAAACGUCUCGCAGUCCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCAGAUCAGCAAGCUGCGGUGAAUACGUUCUCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUUUACCAGAAGGCGGUAGAUUAACCUCGUAAGAGGAGGUCGCCGACCACGGUAAGAUUCAUGACUGGGGUG
View annotations in different species by clicking on species names.
Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.