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Telmatocola sphagniphila 16S ribosomal RNA secondary structure diagram

Telmatocola sphagniphila 16S ribosomal RNA URS000002F9C2_1123043

Automated summary: This rRNA sequence is 1,422 nucleotides long and is found in Telmatocola sphagniphila. Annotated by 3 databases (ENA, RefSeq, SILVA). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 1 S  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AGGCUCAGAACGAACGUUGGCGGCAUGGAUUAGGCAUGCAAGUCGAAUGAAUCCGUAGCAAUACGGGGAAAUGGCGAAAGGGGCAGUAAUGUGUGGGUAACCUACCUUGGGGAUGGGCAUAGCCGGUCUAACGGCCGGGUAAUUCCCAGCGAUUCGGCGAAGUGGCAUCACUUUGCCGGGAAAUGAAUUUCGCCUCGAGAGGGGCCCACAUGAUAUUAGAUAGUUGGCGGUGUAACGGACCACCAAGUCUAAGAUGUCUAGCGGGUGUGAGAGCACGACCCGCGCCACUGGCACUGUGACACUGGCCAGACACCUACGGGUGGCUGCAGUCGAGGAUCUUCGUCAAUGGGCGAAAGCCUGAACGAGCGAUUAGCCGCGUGCGCGAUGAAGGCCUUCGGGUUGUAAAGCGCGAAAGAGGSAAUAAAGGGAAACUUGAUUGAACCUCAGUAAGCUCGGGCUAAGUUUGUGCCAGCAGCCGCGGUAAGACGAACCGAGCGAACGUUGUUCGGAAUCACUGGGCAUAAAGGGCGCGUAGGCGGGUUUCUAAGUCCGUGGUGAAAUACUUCAGCUCAACUGGAGAACUGCCUCGGAUACUGGGAAUCUCGAGUAAUGUAGGGGCACGUGGAACGGCUGGUGGAGCGGUGAAAUGCGUUGAUAUCAGUCGGAACUCCGGUGGCGAAGGCGAUGUGCUGGACAUUUACUGACGCUGAGGCGCGAAAGCCAGGGGAGCAAACGGGAUUAGAUACCCCGGUAGUCCUGGCCCUAAACGAUGAGAACUAGAUAGUAGACUUUCAUGGGUUUACUGUCGAAGCAAAUGUGCUAAGUUCUCCGCCUGGGGAGUAUGGUCGCAAGACUGAAACUCAAAGGAAUUGACGGGGGCUCACACAAGCGGUGGAGCAUGUGGCUUAAUUCGAGGCUACGCGAAGAACCUUAUCCUAGACUUGACAUGUGCGAAAGCGAUAGGAAGUAGUGUGCGGAAACGUUACACGAACGGUAUCCAAUCCGGAACCUAUUACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUCGCGUUAAGUCGCUUAACGAGCGAAACCCUUACCCUUAGUUGCCAGCGGGUUAUGCCGGGGACUCUAGGGGGACUGCCUAUGUUAAAUAGGAGGAAGGCGGGGAUGACGUCAAGUCCUCAUGGCCUUUACGUCUAGGGCUGCACACGUGCUACAAUGGUGUGAACAAAGGGACGCAAACUCGCGAGAGGGAGCAAAUCCCAAAAAACACACCCCAGUUCAGAUCGAAGGCUGCAACUCGCCUUCGUGAAGUUGGAAUCGCUAGUAAUCGCGGGUCAGCAACACCGCGGUGAAUGUGUUCCUGAGCCUGGUACACACCGCCCGUCAAGCCACGAAAGAGUGGAGUGCCCGAAGUCGCUAACGCGCCG

    Taxonomic tree

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    2D structure New