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Shimia marina 16S ribosomal RNA secondary structure diagram

Shimia marina 16S ribosomal RNA URS0000020BE5_321267

Automated summary: This rRNA sequence is 1,382 nucleotides long and is found in Shimia marina. Annotated by 4 databases (ENA, Greengenes, SILVA, RefSeq). Described in 3 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Shimia marina 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AACGAACGCUGGCGGCAGGCCUAACACAUGCAAGUCGAGCGCGCCCUUCGGGGUGAGCGGCGGACGGGUUAGUAACGCGUGGGAACGUACCCAGAUCUACGGAAUAGCCUUUGGAAACGAAGAGUAAUACCGUAUACGCCCUUCGGGGGAAAGAUUUAUCGGAUUUGGAUCGGCCCGCGUUAGAUUAGAUAGUUGGUGGGGUAACGGCCUACCAAGUCUACGAUCUAUAGCUGGUUUUAGAGGAUGAUCAGCAACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUCUUGGACAAUGGGCGCAAGCCUGAUCCAGCCAUGCCGCGUGAGUGAUGAAGGCCUUAGGGUCGUAAAGCUCUUUCGCCAGGGAUGAUAAUGACAGUACCUGGUAAAGAAACCCCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGGGUUAGCGUUGUUCGGAAUUACUGGGCGUAAAGCGCGCGUAGGCGGGUUGUUAAGUUAGAGGUGAAAUCCCGGGGCUCAACCCCGGAACUGCCUUUAAUACUGGCAACCUAGAGUUCGAGAGAGGUGAGUGGAAUUCCGAGUGUAGAGGUGAAAUUCGUAGAUAUUCGGAGGAACACCAGUGGCGAAGGCGGCUCACUGGCUCGAUACUGACGCUGAGGUGCGAAAGUGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACACCGUAAACGAUGAAUGCCAGUCGUCGGGUAGCAUGCUAUUCGGUGACACACCUAACGGAUUAAGCAUUCCGCCUGGGGAGUACGGUCGCAAGAUUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGCAGAACCUUACCAACCCUUGACAUCCUAGGACAACUCCAGAGAUGGAGCCUUCCUUCGGGACCUAGUGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUCGGUUAAGUCCGGCAACGAGCGCAACCCACAUCCUUAGUUGCCAGCAGUUCGGCUGGGCACUCUAGGGAAACUGCCCGUGAUAAGCGGGAGGAAGGUGUGGAUGACGUCAAGUCCUCAUGGCCCUUACGGGUUGGGCUACACACGUGCUACAAUGGCAGUGACAAUGGGUUAAUCCCCAAAAACUGUCUCAGUUCGGAUUGGGGUCUGCAACUCGACCCCAUGAAGUCGGAAUCGCUAGUAAUCGCGUAACAGCAUGACGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUUGGUUCUACCCGACGGCCGUGCGCUAACCUUUUGGAGGCAGCGGACCACGGUAGGAUCAGCGACUGGGGUG

    Taxonomic tree

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    2D structure New