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Geobacter bemidjiensis Bem 16S ribosomal RNA secondary structure diagram

Geobacter bemidjiensis Bem 16S ribosomal RNA URS000001D3A8_404380

Automated summary: This rRNA sequence is 1,555 nucleotides long and is found in Geobacter bemidjiensis Bem. Annotated by 5 databases (Rfam, RefSeq, SILVA, ENA, RDP). Described in 6 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Geobacter bemidjiensis Bem 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AAACUGGAGAGUUUGAUCCUGGCUCAGAACGAACGCUGGCGGCGUGCUUAACACAUGCAAGUCGAACGGGAUCCAGAGCUUGCUCUGGUGAGAGUGGCGCACGGGUGAGUAACGCGUGGAUAACCUGCCCUGGUAUCUGGAAUAACAUCUCGAAAGGGGUGCUAAUACCGGAUAAGCCUACGGAGCCUUCGGUCUCUGCAGGAAAAGGUGGCCUCUAUUUAUAAGCUACCGUAUCAGGAUGGGUCCGCGUACCAUUAGCUAGUUGGUAGGGUAAUGGCCUACCAAGGCUACGAUGGUUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUUUUGCGCAAUGGGGGAAACCCUGACGCAGCAACGCCGCGUGAGUGAUGAAGGCUUUCGGGUCGUAAAGCUCUGUCAGUAGGGAAGAAAUGAAAACGGUUAAUACCCGUUUUUCUUGACGGUACCUACAAAGGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAGGGUGCAAGCGUUGUUCGGAUUUAUUGGGCGUAAAGCGCGUGUAGGCGGUUUCUUAAGUCUGAUGUGAAAGCCCUGGGCUCAACCCAGGAAGUGCAUUGGAUACUGGGAGACUUGAAUACGGGAGAGGGUAGUGGAAUUCCUAGUGUAGGAGUGAAAUCCGUAGAUAUUAGGAGGAACACCGGUGGCGAAGGCGGCUACCUGGACCGAUAUUGACGCUGAGACGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGAGAACUAGGUGUUGCGGGUAUUGACCCCUGCAGUGCCGCAGCUAACGCAUUAAGUUCUCCGCCUGGGAAGUACGGUCGCAAGACUAAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGACGCAACGCGCAGAACCUUACCUGGGCUUGACAUCUGCGGAACCUCCCCGAAACGGGAGGGUGCCUUCGGGAGCCGCAAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCCUAUCCUUAGUUGCCAUCAUUUAGUUGGGCACUCUAAGGAGACUGCCGGUGUCAAACCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGUCCAGGGCUACACACGUGCUACAAUGGCCGGUACAAAGAGCAGCGAUACCGCGAGGUGGAGCCAAUCUCAAAAAGCCGGUCUCAGUUCGGAUUGGAGUCUGCAACUCGACUCCAUGAAGUUGGAAUCGCUAGUAAUCGCGGAUCAGCACGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGGGAGUCGGUUGGUCCCGAAGUGCGUGAGCUAACCCGCAAGGGAGGCAGCGUCCUAAGGAAUGGCCGGUGACUGGGGUGAAGUCGUAACAAGGUAGCCGUAGGGGAACCUGCGGCUGGAUCACCUCCUUU

    Taxonomic tree

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    This sequence is found in 0 other species

    1. Geobacter bemidjiensis strain Bem 16S ribosomal RNA, rRNA
    2D structure New