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Chroococcidiopsis thermalis PCC 7203 23S ribosomal RNA secondary structure diagram

Chroococcidiopsis thermalis PCC 7203 23S ribosomal RNA URS000001B320_251229

Automated summary: This ncRNA sequence is 2,879 nucleotides long and is found in Chroococcidiopsis thermalis PCC 7203. Annotated by 3 databases (RefSeq, ENA, SILVA). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (LSU_rRNA_bacteria, RF02541).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

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    Gene Ontology annotations

    Sequence

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    UCAAGCGAAAUACAGCUGACGGUGGAUACCUAGACACGCAGAGGCGAAGAAGGACGUGGCGACCGACGAAAAGCUUCGGGGAGCUGGCAGCAAGCACUGAGCCGAAGAUAUCCGAAUGGGGCAACCCCCUUGUACAGCCUGUUGAAUCCAUAGACAGGUAUGAGCCAACCCAGCCAACUGAAACAUCUUAGUAGCUGGAGGAAAAGAAAUCAAACGAGAUUCUCCCAGUAGUGGUGAGCGAAAGGAGAACAGCCUAAACCAGAGUACAAGUAUUCUGGGGUAGUGGGACAGCGAGAUGGAAGCACUAGACUAGACGAAACGAUUGACAAAUCGUACCAAAGAGGGUGAUAGUCCCGUAGUCGAAAGUUGAAGUGCUACUAGCUGAAUCCCGAGUAGCUAGGGACACGGGAAAUCCCUAGUGAAUCAGCCGAGACCACUCGGUAAGGCUAAAUACUACUGCGUGAGCGAUAGAGCAACAGUACCGCGAGGGAAAGGUGAAAAGAACCCCGAUAAGGGGAGUGAAAUAGAACAUGAAACCGUCAGUUGACAAGCAGUGGAAGGAUGAUUCAACGUCCGACCGCGUGCCUGUUGAAGAAUGAGCCGGCGAGUUAUAGUCACUGGUAUGGCGAAUAGCCACAGCGAAAGCGAGUCUGAAGUGGGCGAAUUAUCAGUGUAUAUAGACCCGAACCUGGGUGAUCUAACCAUGGCCAGGAUGAAGCUUGGGUAACACCAAGUGGAGGUCCGCACCGACCGAUGUUGAAAAAUCGGCGGAUGAGCUGUGGUUAGGGGUGAAAUGCCAAUCGAACCCAGAGCUAGCUGGUUCUCCCCGAAAUGUGUUGAGGCGCAGCGGUAAGUGAUAAUUGCUGGGGGUAAAGCACUGUUUCGGUGCGGGCGGCCUCAAGCUGUACCAAAUCGAGACAAACUCAGAAUACCAGCAACAAUCUUACUAGUGAGACGGUGGGGGAUAAGCUUCAUCGUCAAGAGGGAAACAGCCCAGACCGCCAGCUAAGGUCCCCAAAUCAAAGUUAAGUGGCAAAGGAGGUGGGAGUGCACAGACAACCAGGAGGUUUGCCUAGAAGCAGCCAUCCUUGAAAGAGUGCGUAAUAGCUCACUGGUCAAGCGCUCCUGCGCCGAAAAUGAACGGGACUAAACUUUGUACCGAAGCUGCGGACUUGUAGCGAUACAAGUGGUAGGGGAGCGUUCUGCGAUAGGGUGAAGCACUAGCGGCAAGCAGGUGUGGACGAAGCAGAAGUGAGAAUGUCGGCUUGAGUAGCGCAAAUAUUGGUGAGAAUCCAAUACCCCGAAACCCUAAGGGUUCCUCCACAAGGCUCGUCCGUGGAGGGUUAGUCAGGACCUAAGGCGAGGCCGAACGGCGUAGUCGAUGGACAACGGGCGAACAAUCCCGUACUGAAGAUUAGUUGUGCAGAGGGACGGAGAAGGCACGCACCAGCCAGAUGUUGGUUACUGGCGCAAUUAACCGAGGCAUCGAGAAGCGGCGAAAACGCUUCGAGCUGGGGUUAAGAGACCGAGGGUCUACGGACCCGAAGUGGUAGCGGUCAAGCUUCCAAGAAAAGCUCUAAACACGUUAACUAAUCGUCACCUGUACCCAAAACCGACACAGGUAGGGAGGUAGAGAAUACUAAGGGGCGCGAGAUAACUCUCUCUAAGGAACUCGGCAACAUGGCCCCGUAACUUCGGAAGAAGGGGUGCCUACGCAAGUAGGUCGCAGUGAAGAGAUCCAGGCGACUGUUUACCAAAAACACAGGUCUCCGCAAAGUCAAUAGACGAGGUAUGGGGGCUGACGCCUGCCCAGUGCCGGAAGGUUAAGGAAGUCGGUCAGGGCCUUGAGCCUAAAGCUGGCGACCGAAGCCCCGGUGAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGGCGUAACGAUCUGGAUGGUGUCUCAGAGAGAGACUCGGCGAAAUAGGAAUGUCUGUGAAGAUACGGACUACCUGCACCUGGACAGAAAGACCCUAUGAAGCUUUACUGUAGCCUGGAAUGGUGUUCGGGCUUUGCUUGCGCAGAAUAGGUGGGAGGCAAUGAUUCACUCCUUGUGGGGAGUGAGGAGCCGCAAUGUGAGAUACCACUCUGGCGAGGCUAGAAUUCUAACCCGCGACCGUUAUCCGGUCGGGGAACAGUUUCAGGUGGGCAGUUUGACUGGGGCGGUCGCCUCCUAAAGUGUAACGGAGGCGCGCAAAGGUUCCCUCAGGCUGGUUGGAAAUCAGCCGCAGAGUGUAAAGGCAAAAGGGAGCUUGACUGCAAGAGUGACAACUCGCGCAGGGUGGAAACACGGCCUUAGUGAUCCGACGGUAGUGAGUGGAAGCGCCGUCGCUCAACGGAUAAAAGUUACUCUAGGGAUAACAGGCUGAUCUCCCCCAAGAGUCCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCAUCGCAACCUGGGGCGGAAGUACGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGUACGUGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCAUAUCCGGUGCAGGCGUUAGAGUAUUGCGAGGAGCCUUCCUUAGUACGAGAGGACCGGGAAGGACGAACCGCUGGUGUACCAGUUAUCGUGCCAACGGUAAACGCUGGGUAGCCAAGUUCGGAGCGGAUAACCGCUGAAAGCAUCUAAGUGGGAAGCCCACCUCCAGAUGAGUACUCUCAUGAAUUAAAUUCAGUAAGGUCACCCACAGAACAUGGGUUGAUAGGUCAGUGGUGGAAGCGUGGUAACACGUGCAGCCGACUGAUACUAACAGACCGAGGGCUUGACCAC

    Taxonomic tree

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    2D structure