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Lactococcus cremoris 23S ribosomal RNA secondary structure diagram

Lactococcus cremoris 23S ribosomal RNA URS0000019328_1359

Automated summary: This rRNA sequence is 2,901 nucleotides long and is found in Lactococcus cremoris. Annotated by 3 databases (SILVA, ENA, RefSeq). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (LSU_rRNA_bacteria, RF02541).

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

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    GGCAAAGUUAAUAAGGGCGCACGGUGGAUGCCUUGGCACUAAGAGCCGAUGAAGGACGUGACUAACGACGAUAUUCUAGGGGGAGCAGUAAGUACGCAUUGAUCCCUAGGUCUCCGAAUGGGGAAACCCAGCUGCUACUAGCAGUUAUUCAUGAGUGAAUACAUAGCUCAUGUAAAGGUAACGCAGAGAACUGAAACAUCUAAGUACCUGCAGGAAGAGAAAGUAAAAACGAUUUCGUAAGUAGCGGCGAGCGAACGCGAAGAAGGGCAAACCAAGAAGCUUGCUUCUUGGGGUUGUAGGACUGCAACGUGGACUUAAGCAUUAUAGUCGAAUAACCUGGGAAGGUUAAUCAAAGAGGGUAAUAAUCCCGUAGACGAAAUAGCGCUUAUACCUAGCAGUAUCCUGAGUAGGGCUGGACACGCGAAAUCCAGUUUGAAUCCGGGAGGACCAUCUCCCAACCCUAAAUACUCCUUAGUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGAGAGGGGAGUGAAAUAGCACCUGAAACCGUGUGCCUACAAGAAGUUCGAGCCCGUUAAUGGGUGAGAGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUACGUUAUGAUGCGAGGUUAAGUUGAAGAGACGGAGCCGUAGGGAAACCGAGUCUGAAUAGGGCGACUUAGUAUCAUGAUGUAGACCCGAAACCUAGUGACCUAUCCAUGAGCAGGGUGAAGGUGUGGUAAGACGCACUGGAGGCCCGAACCAGGACACGUUGAAAAGUGUUUGGAUGACUUGUGGAUAGCGGAGAAAUUCCAAACGAACUGGGAGAUAGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCGUCGAAAUGUAAGUGUAUUGGAGGUAGAGCACUGUUUGGGUGAGGGGUCCGUCUAGGAUUACCAAUCUCAGAUAAACUCCGAAUGCUAAUACACAUGUUCGGCAGUCAGACUGCGAGUGCUAAGAUCCGUAGUCGAAAGGGAAACAGCCCAGACCAACAGCUAAGGUCCCAAAAUAUAUGUUAAGUGGAAAAGGAUGUGGGGUUGCACAGACAACUAGGAUGUUAGCUCAGAAGCAGCUAUCAUUCAAAGAGUGCGUAAUAGCUCACUAGUCGAGUGACCCUGCGCCGAAAAUGUACCGGGGCUAAACAUAUUACCGAAGCUUUGGAUUGAUAUUUUAUCAAUGGUAGGAGAGCGUUCUUAACCGCGAUGAAGGUAUACCGUGAGGAGUGCUGGAGCGUUAAGAAGUGAGAAUGCCGGUAUGAGUAGCGCAAGAUAAGUGAGAAUCUUAUCCACCGUAAGACUAAGGUUUCCAGGGGAAGGCUCGUCCGCCCUGGGUUAGUCGGGACCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGACAACUGGUUGAUAUUCCAGUACUAGAUAUGAUCGUGAUGGAGGGACGCAGUAGGCUAAGAGAUGCCAGUUAAUGGAUUCUGGUCUAAGCAGUGAGGUGUGAGAUGUGUCAAAUGCAUUUCUCUCUAACAUUGAGCUGUGAUGGGGAAGCAACUACGGUUGCGAACUCUCUGAUGUCACACUGCCAAGAAAAGCUUCUAGCGUAAAGUCAUAUCUACCCGUACCGCAAACCGACACAGGUAGUCGAGGCGAGUAGCCUCAGGUGAUCGAGAGAACUCUCGUUAAGGAACUCGGCAAAAUAGCCCCGUAACUUCGGGAGAAGGGGUGCUGGUGUAAAAGCCAGCCGCAGUGAAUAGGCCCAAGCAACUGUUUAUCAAAAACACAGCUCUCUGCUAAACCGCAAGGUGAUGUAUAGGGGGUGACGCCUGCCCGGUGCUGGAAGGUUAAGAGGAGUGCUUAGACGUAAGUCGAAGGUAUGAAUUGAAGCCCCAGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGGCGUAAUGAUUUGGGCACUGUCUCAACGAGAGACUCGGUGAAAUUUUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGACCCCAUGGAGCUUUACUGUAGUUUGAUAUUGAGUACCUGUAAGUCAUGUACAGGAUAGGUAGGAGCCAUUGAAAUAGGGACGCUAGUUUCUAUUGAGGCGUUGUUGGGAUACUACCCUUGACUUAUGGUUACUCUAACCCGCUGGCAUAAUCGGCCAGGGAGACAGUGUCUGACGGACAGUUUGACUGGGGCGGUCGCCUCCUAAAGAGUAACGGAGGCGCUCAAAGGUUGGCUCAGAUUGGUUGGAAAUCAAUCGUAGAGUGUAAAGGUAAAAGCCAGCUUGACUGCGAGAGCUACAACUCGAGCAGGUAGGAAACUAGGACUUAGUGAUCCGGUGGUACCGCAUGGAAGGGCCAUCGCUCAACGGAUAAAAGCUACCCUGGGGAUAACAGGCUUAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUCGCGGGCGUAGGUAAUUUGAGAGGAUCUGUCCUUAGUACGAGAGGACCGGGAUGGACUUACCGCUGGUGUACCAGUUGUUCCGCCAGGAGCACGGCUGGAUAGCUAUGUAGGGAAGGGAUAAGCGCUGAAAGCAUCUAAGUGCGAAGCCCACCUCAAGAUGAGAUUACCCAUUCGUAAGAAUUAAGAGCCCAGAGAGAUGAUCUGGUAGAUAGGCUGGAAGUGGAAGAGUUGCGAGACUUGGAGCGGACCAGUACUAAUCGCUCGAGGACUUUACCAA

    Taxonomic tree

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    This sequence is found in 7 other species

    1. Lactococcus lactis rRNA
    2. Lactococcus cremoris subsp. cremoris GE214 bacterial LSU rRNA
    3. Lactococcus cremoris subsp. cremoris NZ9000 bacterial LSU rRNA
    4. Lactococcus cremoris subsp. cremoris SK11 bacterial LSU rRNA
    5. Lactococcus cremoris subsp. cremoris TIFN6 Bacterial large subunit ribosomal RNA
    6. Lactococcus cremoris subsp. cremoris UC509.9 LSU rRNA
    7. Lactococcus lactis subsp. lactis 23S ribosomal RNA
    2D structure