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Lactococcus cremoris 23S ribosomal RNA secondary structure diagram

Lactococcus cremoris 23S ribosomal RNA URS0000019328_1359

Automated summary: This rRNA sequence is 2,901 nucleotides long and is found in Lactococcus cremoris. Annotated by 3 databases (RefSeq, SILVA, ENA). Described in 4 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (LSU_rRNA_bacteria, RF02541).

Genome locations

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This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
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    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GGCAAAGUUAAUAAGGGCGCACGGUGGAUGCCUUGGCACUAAGAGCCGAUGAAGGACGUGACUAACGACGAUAUUCUAGGGGGAGCAGUAAGUACGCAUUGAUCCCUAGGUCUCCGAAUGGGGAAACCCAGCUGCUACUAGCAGUUAUUCAUGAGUGAAUACAUAGCUCAUGUAAAGGUAACGCAGAGAACUGAAACAUCUAAGUACCUGCAGGAAGAGAAAGUAAAAACGAUUUCGUAAGUAGCGGCGAGCGAACGCGAAGAAGGGCAAACCAAGAAGCUUGCUUCUUGGGGUUGUAGGACUGCAACGUGGACUUAAGCAUUAUAGUCGAAUAACCUGGGAAGGUUAAUCAAAGAGGGUAAUAAUCCCGUAGACGAAAUAGCGCUUAUACCUAGCAGUAUCCUGAGUAGGGCUGGACACGCGAAAUCCAGUUUGAAUCCGGGAGGACCAUCUCCCAACCCUAAAUACUCCUUAGUGACCGAUAGUGAACCAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGAGAGGGGAGUGAAAUAGCACCUGAAACCGUGUGCCUACAAGAAGUUCGAGCCCGUUAAUGGGUGAGAGCGUGCCUUUUGUAGAAUGAACCGGCGAGUUACGUUAUGAUGCGAGGUUAAGUUGAAGAGACGGAGCCGUAGGGAAACCGAGUCUGAAUAGGGCGACUUAGUAUCAUGAUGUAGACCCGAAACCUAGUGACCUAUCCAUGAGCAGGGUGAAGGUGUGGUAAGACGCACUGGAGGCCCGAACCAGGACACGUUGAAAAGUGUUUGGAUGACUUGUGGAUAGCGGAGAAAUUCCAAACGAACUGGGAGAUAGCUGGUUCUCUCCGAAAUAGCUUUAGGGCUAGCGUCGAAAUGUAAGUGUAUUGGAGGUAGAGCACUGUUUGGGUGAGGGGUCCGUCUAGGAUUACCAAUCUCAGAUAAACUCCGAAUGCUAAUACACAUGUUCGGCAGUCAGACUGCGAGUGCUAAGAUCCGUAGUCGAAAGGGAAACAGCCCAGACCAACAGCUAAGGUCCCAAAAUAUAUGUUAAGUGGAAAAGGAUGUGGGGUUGCACAGACAACUAGGAUGUUAGCUCAGAAGCAGCUAUCAUUCAAAGAGUGCGUAAUAGCUCACUAGUCGAGUGACCCUGCGCCGAAAAUGUACCGGGGCUAAACAUAUUACCGAAGCUUUGGAUUGAUAUUUUAUCAAUGGUAGGAGAGCGUUCUUAACCGCGAUGAAGGUAUACCGUGAGGAGUGCUGGAGCGUUAAGAAGUGAGAAUGCCGGUAUGAGUAGCGCAAGAUAAGUGAGAAUCUUAUCCACCGUAAGACUAAGGUUUCCAGGGGAAGGCUCGUCCGCCCUGGGUUAGUCGGGACCUAAGGCGAGGCCGAAAGGCGUAGUCGAUGGACAACUGGUUGAUAUUCCAGUACUAGAUAUGAUCGUGAUGGAGGGACGCAGUAGGCUAAGAGAUGCCAGUUAAUGGAUUCUGGUCUAAGCAGUGAGGUGUGAGAUGUGUCAAAUGCAUUUCUCUCUAACAUUGAGCUGUGAUGGGGAAGCAACUACGGUUGCGAACUCUCUGAUGUCACACUGCCAAGAAAAGCUUCUAGCGUAAAGUCAUAUCUACCCGUACCGCAAACCGACACAGGUAGUCGAGGCGAGUAGCCUCAGGUGAUCGAGAGAACUCUCGUUAAGGAACUCGGCAAAAUAGCCCCGUAACUUCGGGAGAAGGGGUGCUGGUGUAAAAGCCAGCCGCAGUGAAUAGGCCCAAGCAACUGUUUAUCAAAAACACAGCUCUCUGCUAAACCGCAAGGUGAUGUAUAGGGGGUGACGCCUGCCCGGUGCUGGAAGGUUAAGAGGAGUGCUUAGACGUAAGUCGAAGGUAUGAAUUGAAGCCCCAGUAAACGGCGGCCGUAACUAUAACGGUCCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCCGCACGAAAGGCGUAAUGAUUUGGGCACUGUCUCAACGAGAGACUCGGUGAAAUUUUAGUACCUGUGAAGAUGCAGGUUACCCGCGACAGGACGGAAAGACCCCAUGGAGCUUUACUGUAGUUUGAUAUUGAGUACCUGUAAGUCAUGUACAGGAUAGGUAGGAGCCAUUGAAAUAGGGACGCUAGUUUCUAUUGAGGCGUUGUUGGGAUACUACCCUUGACUUAUGGUUACUCUAACCCGCUGGCAUAAUCGGCCAGGGAGACAGUGUCUGACGGACAGUUUGACUGGGGCGGUCGCCUCCUAAAGAGUAACGGAGGCGCUCAAAGGUUGGCUCAGAUUGGUUGGAAAUCAAUCGUAGAGUGUAAAGGUAAAAGCCAGCUUGACUGCGAGAGCUACAACUCGAGCAGGUAGGAAACUAGGACUUAGUGAUCCGGUGGUACCGCAUGGAAGGGCCAUCGCUCAACGGAUAAAAGCUACCCUGGGGAUAACAGGCUUAUCUCCCCCAAGAGUUCACAUCGACGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGUAGUCGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCCCUAUCCGUCGCGGGCGUAGGUAAUUUGAGAGGAUCUGUCCUUAGUACGAGAGGACCGGGAUGGACUUACCGCUGGUGUACCAGUUGUUCCGCCAGGAGCACGGCUGGAUAGCUAUGUAGGGAAGGGAUAAGCGCUGAAAGCAUCUAAGUGCGAAGCCCACCUCAAGAUGAGAUUACCCAUUCGUAAGAAUUAAGAGCCCAGAGAGAUGAUCUGGUAGAUAGGCUGGAAGUGGAAGAGUUGCGAGACUUGGAGCGGACCAGUACUAAUCGCUCGAGGACUUUACCAA

    Taxonomic tree

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    This sequence is found in 5 other species

    1. Lactococcus lactis bacterial LSU rRNA
    2. Lactococcus lactis subsp. cremoris GE214 bacterial LSU rRNA
    3. Lactococcus lactis subsp. cremoris NZ9000 bacterial LSU rRNA
    4. Lactococcus lactis subsp. cremoris SK11 bacterial LSU rRNA
    5. Lactococcus lactis subsp. cremoris TIFN6 Bacterial large subunit ribosomal RNA
    6. Lactococcus lactis subsp. cremoris UC509.9 LSU rRNA
    2D structure New