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Enterococcus casseliflavus 16S ribosomal RNA secondary structure diagram

Enterococcus casseliflavus 16S ribosomal RNA URS0000015C11_37734

Automated summary: This rRNA sequence is 1,559 nucleotides long and is found in Enterococcus casseliflavus. Annotated by 3 databases (ENA, RefSeq, SILVA). Described in 1 paper. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Enterococcus casseliflavus 16S ribosomal RNA sequence is a product of 16S rRNA gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 2 N  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AGAGUUUGAUNNUGGCUCAGGACGAACGCUGGCGGCGUGCCUAAUACAUGCAAGUCGAACGCUUUUUCUUUCACCCGAGCUUGCUCCACCGAAAGAAAAAGAGUGGCGAACGGGUGAGUAACACGUGGGUAACCUGCCCAUCAGAAGGGAUAACACUUGGAAACAGGUGCUAAUACCGUAUAACACUAUUUUCCGCAUGGAAGAAAGUUGAAAGGCGCUUUUGCGUCACUGAUGGAUGGACCCGCGGUGCAUUAGCUAGUUGGUGAGGUAACGGCUCACCAAGGCAACGAUGCAUAGCCGACCUGAGAGGGUGAUCGGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUAGGGAAUCUUCGGCAAUGGACGAAAGUCUGACCGAGCAACGCCGCGUGAGUGAAGAAGGUUUUCGGAUCGUAAAACUCUGUUGUUAGAGAAGAACAAGGAUGAGAGUAAAAUGUUCAUCCCCUGACGGUAUCUAACCAGAAAGCCACGGCUAACUACGUGCCAGCAGCCGCGGUAAUACGUAGGUGGCAAGCGUUGUCCGGAUUUAUUGGGCGUAAAGCGAGCGCAGGCGGUUUCUUAAGUCUGAUGUGAAAGGCCCCGGCUCAACCGGGGAGGGUCAUUGGAAACUGGGAGACUUGAGUGCAGAAGAGGAGAGUGGAAUUCCAUGUGUAGCGGUGAAAUGCGUAGAUAUAUGGAGGAACACCAGUGGCGAAGGCGGCUCUCUGGUCUGUAACUGGAACGCUGAGGCUCGAAAGCGUGGGGAGCGAACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGGAGAGUGCUAAGUGUUGGAGGGUUUCCGCCCUUCAGUGCUGCAGCAAACGCAUUAAGCACUCCGCCUGGGGAGUACGACCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGAAGAACCUUACCAGGUCUUGACAUCCUUUGACCACUCUAGAGAUAGAGCUUCCCCUUCGGGGGCAAAGUGACAGGUGGUGCAUGGUUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUUGUUAGUUGCCAUCAUUUAGUUGGGCACUCUAGCGAGACUGCCGGUGACAAACCGGAGGGAAGGUGGGGAUGACGUCAAAUCAUCAUGCCCCUUAUGACCUGGGCUACACACGUGCUACAAUGGGAAGUACAACGAGUUGCGAAGUCGCGAGGCUAAGCUAAUCUCUUAAAGCUUCUCUCAGUUCGGAUUGUAGGCUGCAACUCGCCUACAUGAAGCCGGAAUCGCUAGUAAUCGCGGAUCAGCACGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCACGAGAGUUUGUAACACCCGAAGUCGGUGAGGUAACCUUUUUGGGAGCCAGCCGCCUAAGGUGGGAUAGAUGAUUGGGGUGAAGUCGUAACAAGGUAGCCGUAUCGAAAGGUGCGGCUGGAUCACCUCCUUU

    Taxonomic tree

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    2D structure New