Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.
Rhizobium etli CFN 42 5S ribosomal RNA secondary structure diagram

Rhizobium etli CFN 42 5S ribosomal RNA URS000000C052_347834

Automated summary: This rRNA sequence is 119 nucleotides long and is found in Rhizobium etli CFN 42. Annotated by 2 databases (RefSeq, ENA). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (5S_rRNA, RF00001).

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GACCUGGUGGUUAUGGCGGGGUGGCUGCACCCGUUCCCUUUCCGAACACGGCCGUGAAACGCCCCUGCGCCCAUGGUACUUCGUCUUAAGACGCGGGAGAGUAGGUCGCUGCCAGGUCU

    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    This sequence is found in 4 other species

    1. Rhizobium etli 5S rRNA
    2. Rhizobium etli bv. mimosae str. Mim1 5S ribosomal RNA
    3. Rhizobium etli bv. phaseoli str. IE4803 5S ribosomal RNA
    4. Rhizobium etli CIAT 652 5S ribosomal RNA
    5. Rhizobium phaseoli Ch24-10 5S ribosomal RNA
    2D structure New