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Asaia krungthepensis 16S ribosomal RNA secondary structure diagram

Asaia krungthepensis 16S ribosomal RNA URS0000000F87_220990

Automated summary: This rRNA sequence is 1,414 nucleotides long and is found in Asaia krungthepensis. Annotated by 4 databases (RefSeq, SILVA, ENA, Greengenes). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (SSU_rRNA_bacteria, RF00177). Asaia krungthepensis 16S ribosomal RNA sequence is a product of rrn gene.

Genome locations

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This sequence is found in {{ locations.length }} genome :

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    Gene Ontology annotations

    Sequence

    Contains ambiguity characters: 2 N  IUPAC notation

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    AGCGAACGCUGGCGGCAUGCUUAACACAUGCAAGUCGCACGGACCNUUCGGGGUGAGUGGCGGACGGGUGAGUAUCGCGUAGGGAUCUAUCCACGGGUGGGGGAUAACANCGGGAAACUGGUGCUAAUACCGCAUGAUACCUGAGGGUCAAAGGCGCAAGUCGCCUGUGGAGGAGCCUGCGUUCGAUUAGCUUGUUGGUGGGGUAAAGGCCUACCAAGGCGAUGAUCGAUAGCUGGUCUGAGAGGAUGAUCAGCCACACUGGGACUGAGACACGGCCCAGACUCCUACGGGAGGCAGCAGUGGGGAAUAUUGGACAAUGGGCGAAAGCCUGAUCCAGCAAUGCCGCGUGUGUGAAGAAGGUCUUCGGAUUGUAAAGCACUUUCGACGGGGACGAUGAUGACGGUACCCGUAGAAGAAGCCCCGGCUAACUUCGUGCCAGCAGCCGCGGUAAUACGAAGGGGGCUAGCGUUGCUCGGAAUGACUGGGCGUAAAGGGCGCGUAGGCGGUUCAUACAGUCAGAUGUGAAAUUCCAGGGCUUAACCUUGGGGCUGCAUUUGAUACGUAUAGACUAGAGUGUGAGAGAGGGUUGUGGAAUUCCCAGUGUAGAGGUGAAAUUCGUAGAUAUUGGGAAGAACACCGGUGGCGAAGGCGGCAACCUGGCUCAUUACUGACGCUGAGGCGCGAAAGCGUGGGGAGCAAACAGGAUUAGAUACCCUGGUAGUCCACGCUGUAAACGAUGUGUGCUGGAUGUUGGGUAACUUAGUUACUCAGUGUCGAAGCUAACGCGCUAAGCACACCGCCUGGGGAGUACGGCCGCAAGGUUGAAACUCAAAGGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAUUCGAAGCAACGCGCAGAACCUUACCAGGGCUUGACAUGGGGAGGCUGUAUCCAGAGAUGGGUAUUUCCCGCAAGGGACCUCCUGCACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUCGUGAGAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUCGCCUUUAGUUGCCAGCACGUUUGGGUGGGCACUCUAGAGGAACUGCCGGUGACAAGCCGGAGGAAGGUGGGGAUGACGUCAAGUCCUCAUGGCCCUUAUGUCCUGGGCUACACACGUGCUACAAUGGCGGUGACAGUGGGAAGCUAGAUGGUGACAUCAUGCCGAUCUCUAAAAGCCGUCUCAGUUCGGAUUGUACUCUGCAACUCGAGUGCAUGAAGGUGGAAUCGCUAGUAAUCGCGGAUCAGCAUGCCGCGGUGAAUACGUUCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUUGGUUUGACCCGAAGCCGGUGAGCGAACCGCAAGGACGCAGCCGACCACGGUCGGGUCAGCGACUGGGGUGAAG

    Taxonomic tree

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    2D structure New