v24

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Homo sapiens (human) HLA complex group 20 (HCG20) URS0000A77672_9606

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HCG20: HCG20 is a noncoding RNA gene that has been identified through an in silico approach to be enriched in ductal carcinoma in situ (DCIS) relative to adjacent normal tissue [PMC6244889]. It is located within 200 kb of several other genes, including LINC00243, TUBB, FLOT1, and IER3 [PMC6597974]. The functions of HCG20 and LINC00243 are currently unknown [PMC6597974]. HCG20 has been found to be a hub differentially expressed long noncoding RNA (DElncRNA) in hepatocellular carcinoma (HCC) with prognostic significance [PMC8456090]. It is included in a prognostic signature formula that was established using multivariate Cox analysis for HCC patients [PMC8456090]. The formula includes several other lncRNAs such as SLC25A30-AS1, HPN-AS1, LINC00607, USP2-AS1, LINC00638, MKLN1-AS and LINC00652 as well [PMC8456090]. These lncRNAs have been confirmed as hub DElncRNAs with prognostic significance in HCC patients [PMC8456090]. Overall, HCG20 is an lncRNA gene that has been implicated in DCIS and HCC and may have potential prognostic value for these diseases.

Genome locations

Gene Ontology annotations

Sequence

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AGUGUCCAUGAUAGUGAAUCCAUUUUGGUUGUGUUGGAUUUGAGGUGGCAAAGAAAUAAGGAACUGGCAUGUGACUGCGGGAAAUUGGAGCUACAAGACAGGAGUUCAGGUGAAAAGAUAGGACUAGAGUUGGAUGCUGAAACUUGCAGUCACACAAGGACUUGAACCUAGAGCUUUUCUAAAGCCCGUACUCUUUCCAGUACCCUGAGCCAGGGGAGCCAGCGGGCAGAAAUGACGUGUGAGGUACCCUCUCUCUCUUCACUUCCAUGUGAUCUGUUACUCAUUUUGUCAAGACAUCCUGGGUCCCAGAGACCACUCUUAUUCCCAGGUGUGUGACCUCCUCCUACAGACUACAGUGGGAAAGACACCAUCUCCAGGUGCCAGGUGCUACACAAGAUACUGGCUAUAGCAGCGAACAGGACAGCCCGUCUCAUCCUCAUGGAGGUCACAGGACAAUGAGAAGAAAGACUUUUUUAUUUUUAUUUUUUUGAGACGGAGUUUUGCUCUUGUUGCCGAGGCUGGAGUGCAGUGGUGUGAUCUCGACUCACUGCAACCUCCGCCUCCCAAGUUCAAGCAAUUAUCCUGCCUCAGGCCUCUUGAGUAGCUGGGAUUACAGGCACCUGCCACCACUCCUGGCUAAUUUUUUGUAUUUUUAGUAGAGACAGGGGUUUCAUCAUGUUGGCCAGGCUGGUCUCGAACUCCUGACCUCAGGUGAUCCACCCACCUCGGCCUCCCAAAGUGCAGGGAUUACAGGCAUGAGCCAUCGAACCCGGCCCAAGAAGAAAGACAUUGAACAAGUAAUUACAGGGUAUUGGGUGUUAUGAAAGAAAAGCAUGGUACUGUAUAAUGAGGUCAUCUAAUUUAGUCUGGGGUGACAAGGAAUGCCUACUAAAGAAGGUAUCGUUUAAGACAUACCUGGGGAAUAGCGGUAGUGAAAAUAGAAGCUCCAGAAAUGCAGGGACCAUGGCUGACAUGUUUACCAUGCCAGUGUCUGGCAUGGAAGAGGCCCAAUUCCUUUGGUUGAAAGGAUGAAGUAAUCUAGCUGAAUAAAGGGUGUGUGCGUGCACGCAGGUGUGUUUGUAGUUAACCUUCCUUUAGCUCAGCUUAGGAAACAGCUUUUGUAAAACUGCGUAACUAGUAGUAGGUGAGAGAGGAAUACGAAUGAUAUACACACCAUUAAAGACAACUUACUAACAGCAUGAAAAAAAAAAAAAAAAAA

Taxonomic tree

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Publications