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Homo sapiens (human) long intergenic non-protein coding RNA 1482 (LINC01482) URS00002FCCB1_9606

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LINC01482: LINC01482 is a long non-coding RNA (lncRNA) that has been found to be significantly associated with overall survival (OS) in elderly CN-AML patients, with a negative correlation [PMC7186486]. In a study, it was discovered that rs11868207 in LINC01482 is in high linkage disequilibrium (LD) with rs8070086, suggesting that they represent the same association signal [PMC9737413]. Furthermore, coding regions from several genes, including LINC01482, were captured and sequenced using smMIPs [PMC9737413]. Within these genes, including LINC01482, 13 variants were found to be significantly associated with the phenotype [PMC9737413]. Specifically, four variants were located in LINC01482 [PMC9737413]. In another study investigating the expression of multiple lncRNAs in CC tumor group, it was observed that LINC01482 was up-regulated and hypomethylated [PMC7571838]. Additionally, a risk score (RS) was calculated using the expression levels of various lncRNAs including LINC01482. The RS formula included coefficients for each lncRNA's expression level and its association with the phenotype [PMC9556814]. In summary, LINC01482 is an lncRNA that has been found to be associated with OS in elderly CN-AML patients and is up-regulated and hypomethylated in CC tumor group. It also has variants associated with the phenotype and contributes to a risk score calculation.

Genome locations

Gene Ontology annotations

Sequence

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CUGCCUCCAUGUGGAGGGAGAUACGGGAAGCUGCAUGUCACCACGGAGACUUCCUUGUUCGUGUCUAUAUGGUUCAUACAUGGCCUUCCCCUUAAUUAAAGAUGUCUUCCGAGGAACAUUUUGUCUAAGAAUAACCCAGUGGAAAUCUCUCACAUAAGAAGUGAUAGAACUACACAUCUGAGUAUGAGCCUGCAUGGCAUAGUGAGUCUGCAACUGUGAACUCGGGAAAUCCUGUACCUUCCCGUGCAGUCGCUCCCCAGCCAUGCAGGUAUUUCCAGAGCCUGGAGAUCCCAGACUACCUUUCAAAAGAAUGAAUUCCAGACCCAGAGAGUCCCCUGGAGGAGAUUCAUGGCAAGCAGCCGUACGAAAUAACAGAAGCCCCAGAGAGGGGAAGCAAUUUCCUGCCUAAGUCGUCCAUCUGUCAGUGGCAAAGCUAGGACUGGAACUCAGGAUUCUCCAUCCCUCUUCCCAAACCUGGCACUAUCUUCCUGGCUUUCUGGGUCUGGAGUCCCAUGUUAGAGGCCCUCUGUUUUCAGAGCAGGACUCAUUGAAUAUGUGUGCUCUUUCUACUCAAGUGCUUCAAGGAUCCUUCCUGGAAAAGCCUCGGUUCCGGACCAGUGCUGUCAUGGCCUCACCAUGUCAUAGAAUUCCCAUCAUUUCACUUGUGACUCCCUUCUUCCUAGGACCCGGGCAUAAAUUCUUGAAGAGUUGAUCUGAGUGACAGACUCCCACGCUAUGCCAAAAACGGCCUCUUAUUUCCCAAUGAUUGAGACCUUUUAUUUGAUCAAUCUCAUGUGCUCACUGGACCCCAGUGAUACCUUCACAUACCUGACACCUCAGGGAAACACAGCUUCCGUUCAAGUCAAGAUCCUUGCUAUACUGCAAACUCUUAUGAAACGUCUAGGAGAAUUUUCAGGCUCCUUUGUAUAUGGAAAAAGGUCAGAAUGAAGCUCCAAAUUCUUCAGCAUGUGUAAAAACUUAAGACAACCAUAUUUUAUUUUUGUUUUAUUUUUUAUUUUUUUCAUUGUUUUUUUUUUUGAGACAGCCUUGCUCUGUUGCCUAGGCUGGAGUGCAGUGGCGCGAUCUCGGCUCAUUGCAACUUCCACCUCCUGGGUUCAAGCGAUUCUUGUGCCUCAGCCUCCCAAGUAGCUGGAAUUACAGGCAUGCACCACCAUUCACAGCUAAUUUUUGUAUUUUUAGUAGAGAUGGGGUUUCACCAUGUUGGCCAGGCUGGUCUCGACCUCCUGACCUCAGGUGAUCCAGUCGUCUUGGCCUCCCAAAGUGCUGGGAUUACAGGCAUGAGCCCCUGUGCCCAGCCAACAACUACAUUUUAAAGCAACUUUAUUCUCAACUGAAUGACAUUUUAAUCACUUUCUUGCCCAUGUGGAUAUGGAUAAGGAUAUUUUGCCAAUAUUCUUGUUUGUGUUUGACUGUGAUGCUAUUGUUAUACAAAGAAUGGGCAGGUGGAGCUAAGCAGAAAGAGACAGUCGGGUACCUGUACCAUGGAAAAUGGAAGAGAGCCAAGCAGACUGCAUCCUUAGGGGGCAGGGAGGUCAGUGCAAGUUGGGACAAAGCCUAGCUGAGUCGGUGAGCACUUCAUGGCAGACUAGUCAAAUUAUAUCUCUUGGACUAAGAUCUUCAUUAAAGGCCUGCACCUCAGAGACAUUUCAGCCUACCAAGGUGCAUCAUUAUGGAAGACUGGGCAUGAUAAUAGUAAUUUAAAUGAAGUUAAAAGAGCAGUCUAAAUUAGAACAGGUAUUCACAUUCCAAUUUCUCUUGAGAAGAGCCUCUGUUGGAUAAAGAAAACUCGCUGAGCAAAAUAAAUCGAUUGGAGGUAAACUUUACCAGCCCUGGAGUGCAAGGUUUAGAAACAUGCACACAUCCCACGGUGUUAAGGGUCCUGCUGUUUUCUUCCAUGUCAUUUCAUCACAGAACAAUUUUCUACAGCAACCUGAUCUACCUUGUGGCCCAGUAAGGCAUGUUUUGUUUUGAGAUGGAGUCUCACUCUGUCGCCCAGGCUGUAGUGCAGUGGCGUGAUCUCCGCUCACUGCAAGCACUGCCUCCCGGGUUCACGCCAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGGACUACAGGCGCCCGCCACCAUGCCCGGCUAAUUUUCUGUAUUUUUAUUAGAGACGGGGUUUCACCAUGUUAGCCAGGAUGGUCUCGAUCUCCUGACCUCUGGGAUCUGCCCGUUUCGGCCUCCCAAAGUGCUGGGAUUACAGGUGUGAGCCACCGCUCCCAGCCAAGCAUGUGAGAGUUUUAAAUCAAAUGUUACCUUGUCCCUAUUAGCCUUACCACUGCUAAAUAUCUACACGGUUCCCUGUUAAGGAGAGUUUCUAAAUGACUCUCUUGAGAAAUCCUGGAUAAAUGGAGAAUGGAGCAUUUUUCCUGCCUCUAAGCUUUGCUCCACUGCAAUCUUUCACAUGCUGUGUAUCCAGAGGGUGACUGCCAGAUAGCUUCUUGAAGAAAGGGAGGAGGAAACGGUCAUUUUCUUGCUGCGCUUUCUAACACCCAACAGAGGAAAUGCACAGCAUAGGUGUGUGGGAGUUUGGCUGACUUAUGGUAAAAAAUAAACAUGGUUUCCUGUU

Taxonomic tree

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Publications