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Homo sapiens (human) OTX2 antisense RNA 1 (head to head) (OTX2-AS1) URS0000BC44B3_9606

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OTX2-AS1: OTX2-AS1, a differentially expressed long non-coding RNA (lncRNA), was validated using TaqMan Fast Advanced Master Mix/TaqMan individual assays [PMC8069050]. The expression of OTX2-AS1 was significantly different between AGS and GES-1 cell lines (1.941 ± 0.191 vs 0.878 ± 0.228, P < .05) and between SGC7901 and GES-1 cell lines (1.635 ± 0.427 vs 0.878 ± 0.228, P < .05) [PMC9905030]. In addition to OTX2-AS1, other lncRNAs such as SOX2OT, GAS5, and NEAT1 were also validated using the same assays [PMC8069050]. These findings suggest that OTX2-AS1 is differentially expressed in various cell lines and may have a role in breast cancer development or progression [PMC9905030]. Further research is needed to fully understand the functional significance of OTX2-AS1 in breast cancer pathogenesis.

Genome locations

Gene Ontology annotations

Sequence

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AUCAAAGAGAAUUUCCCUUUAGCUUAGCAAUGUGCUGAAGCUCUUAAAAGAUUGGAUCUGAGAGAGAGAGACAGAGAGGAGAAAGAGAACUAGAGACAGAGAGAGGCAGACAAGGAAGGGGGGGGGGGGUGAAAGACUUUCUUUUUCUUUCUAGAGGAAUUCUGCCCAGACUCUGCAGCAGUUGGUAGCAGGCAAGCUUUCUCCUGGGUGUCGCCUUGAAAAGUUGCAAAAUUGCUCUUCACCUGUAAGAACAUGCUCUUUAUCUUCCAGUCUCUUCUUGUCAAUUUGGAAAUUGCAGACUGCCCGGCUCAGGCUGAAGGGCAGUGGCACAAUCUCGGCUCACCGAAGCCUCCACCUCCCAGAUUCAAGCGAUUCUCAUGCCUCAGCUUCCCAAGUAGCUGGGAUUACAGGCUUGUCAAAGAAAAUUUCUUAAUGAAAGCGAUGAUGAUGUCGACCUUAACCUCCAGAAUGAAGAUACUUCAGGACUUAGUCUGAGAAGGCUACCAAGUCAUGAUGGAGAAAAACGUGAAACCACUGAUUCAGUUCAUUGCAAAUUCAUUCUACCAAACCUUACCUGGCUCUUGUUGCUGCUUGGUAGUCCUUUUAUUAAUCUCUUGGAGACUCACUGAUUAGUUUCCUCCAUUGAUCAUCUAAAAGCUUUUUUCAUAUUUUUGAAACUCACUGUUUGAUCUCCCCUUCCCCUUGUACUCGGAAGAUGAUCUUGCUUUCUGCUUUACUGAGAAGUUCAAGGUUAUCUGCAAUCUCCUUCAACUUUUCACUCCUAUCCUAUUUUCUAUUUUCCUUCAUCUCUUGCUUCCUCUGCUCUUUUGUUUUAGGGAAAGAAACAGUCCCUUUAUUUCUAGGUUGAACUCAACUUCUGCAGGACUUUUGUCUGUAAAUUGUACUUCUUUUUUUUUGAGACAGAGUCUCGCUCUGUCACCCAGGCUGGAGUGCAGUGGCAUGAUCUCAGGUCACUGCAACCUCUACCUCCCAGGUUAAAGCAAUUCUCCUGCCUCAGCUUCCUGAGUAGCUGGGAUUACAGGCGCCACUCCCGGCUAAAUUUUUGUAUUUUUAGUAGAGACGGGGUUUGGCUAUGUUGGCCAGGCUGGUCUCAAAUUCCUGACUUCAGGUGAUGCACCCACCUCCGCCCGCCUCGGCCUCCCAAAGUGCUGGCAUUACAGAUGUGAGCCACCGUGCCCAGCUAAAUUGUACCUUCUGUUCCUUAAAAAUCCUAAAAUCCCUUGUUGUAGGUUCUUUAAUUUUGAGAAAGUAAUAAAUAAAGCACAGAGAUUAAUAAGACAAAUAUGCUUGUUUGCAAAACCCAGAAUUGACUGUUAAUAUUAUCAUACACUGGCUUAUCCUUUUUCUAAUAAAAAAGUUUCAGAUAAAGUUGAAGUUCCCCUUGACCUACCUUUUCAGUCCUGUUGCCUGCAUUCCCUCCCUCAAAGCAACCCUAUAUAAUAUCGGCAUGUAUUCUUUGAGGUCAUUAAAGAAUACAUUUAUGUGCCCAUAUACAUAAUAAUGUGUGUGAUUGUUUAGUGGGUAAUUUAAGAAUUUACAUAUUUAAUAUUCACAGUCUAUUUUGUGAUGUUUCUGUCUUCUAUCCAUGCUAGUAUAUGUAGAGCUAUUUGUAAGUUCCCUGAGGGCAGGGACUUUGUCUUGCUCAUUGCUGAAUCUCCAGCACCUAGAAUAGCAUUUGGCAUAUAGCAAACAUUCAAUCUUUCUUCCUUCCUUCCUUCCUUCCUUCCUUCCUUCCUUCUUUCCUUCCUUCCUUUCUUUCUCUCUCUCUUUUUCUUUCUUUCUUUCUUUCUUUUCUUUCUUUCUCUCUCUUUCUCUCUCCCUCUCUCCCUCUCUCCUUUCCUUUCUCUUUCUUUCUUUCUUUAUUCUUCCUUUUUUUUUGUUGACAGGAUCUCACUCUGUCUCCCAGGCUGGAGUGCAUUGGCACCAUCACUGCUCACUGCAACCUCCUCCUUCCAGGCUCAAGCAAUCCUCCCAUUUCAGCCUCCCAAGUGGCUGGGACUACAGGAGUGCACCACCUUGCCUGGAUAAUUUUUUGUAUUUUUUUUUUGGAGAGACAGGGUUUCAGCAUGUUGCCCAGACUGGUCUCAAACUCCUUUGCUCAAGUGUUCCUCCUGCCUUGGCCUCCCAAAGUGCUGGGACUAUAGAUGUGAGCCACUAUGCCAGCCAAUAUAUGUAUAUAUUUCUUAAGUGAGUUAAUAUCAUUCAUUUUUAACUGCUGUGUAGUAAUCAACUGUAUGAAUAUUCCACAUAUCACAUUUUAUUUAUUCAUUCUCCCACCAGUAGACAAUGUGUGCUUUCCUAAUUUCCAUGCUUCUUAUUACAAAUAUUGUUGUGGAACAGCCUUGUACAAGUCUCCUGUGCCUAUGUUUGAGUUGUAUCAGAGUUGGAAUUGCUGCUUGUCACAAAUAAACUUUAAACUAGAUUUAGCCAAAUUGCUUUUCAAAGUUUUCUGGUUUUAAAACAUGUUCAAGAAUUUCUCUCCAUAUUUUUUUCCCUUUGAGUGUUCUAUACCCUGAAACAAUAGUUUUAUUCUUUCUAUCAGUGUUUUAACUUUUCAAGAUGAUAAUCUAUGGCCUUAGGAUCUUCAUGCCUGAUGCUUGAAAGAACUAACCUUUGACUUUUAAGUGAUAUUAGCCAACCUCCCCUUAUAAAGAUAAUUAAUGUAUAAAUACAUAUGUGUAUCUGAGAAAACUAUCACUUUGAUCAUAAAAUUAUUUAAACAAAAUUUGACUACUAUAAUGUUGCUUUUAUGUAACUAAUUGCAAACCAUUUUGUUCUAUAACUACUUAACUAUAUAUCUUUAUAAAUAAAUUUUAAGAUCUUCAAGGGCAUAGUUUGUGUCUUACUCAACUUCUUAUGUCCAUAGCACCUAGAACGUAAUAAAUGGCACAUGUAUAUGGAAAAAUU

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Publications