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Homo sapiens (human) long intergenic non-protein coding RNA 1684 (LINC01684) URS0000A773AE_9606

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LINC01684: LINC01684 is a long non-coding RNA (lncRNA) that has been identified as one of the six lncRNAs associated with immunophenotypes in glioblastoma (GBM) cases [PMC9977673]. These lncRNAs were identified through the analysis of transcriptome information from 144 GBM cases using the TCGA database [PMC9977673]. The six immunophenotype-related lncRNA signatures, including LINC01684, were identified using the minimum redundancy maximum relevance (mRMR) feature selection method and the random forest model [PMC7874158]. The expression levels of LINC01684 and other immunophenotype-related lncRNAs were found to be significantly higher in high immunophenotype (IH) samples compared to low immunophenotype (IL) samples [PMC7874158]. LINC01684 was found to be related to antimicrobials, along with another lncRNA called USP30-AS1 [PMC7874158]. Additionally, LINC01684 was classified as a "constitutive" lncRNA, while USP30-AS1, HCP5, PSMB8-AS1, and LINC01506 were classified as "IH-specific" lncRNAs [PMC7874158]. Furthermore, in G-CSF treatments for GBM cases, LINC01684 was one of the overexpressed long intergenic non-coding RNAs (lincRNAs) along with other uncharacterized lincRNAs such as LINC01197 and LINC01596 [PMC7088127]. Overall, these findings highlight the potential role of LINC01684 in GBM and its association with immunophenotypes.

Genome locations

Gene Ontology annotations

Sequence

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AAGUGACUGUAGGUUUAGAUGAAUGGAAAAUGAACUUGCCAGUUCACAGCUAUGUCCUUCCCAAUUUAGGAGGUUAAGGGCAGGAAAAACAUGAGAAACUCUUUUGAGAAGCUGCACAAGCUGACAUGGAGGAUCAAGGAUUUCAAAAGCUUUGAAUAUAAAGAGGUCUACCUUAAAUCAGUAAGGUCUGUGGCUGUCCAGAUGCACAUCAUAAUCGGCACAGAACUCUACCAUUUGGUCAAAACCAAAAACUAACUGGGACGCCUAAGACUGUAACAGACCCCUGGAGACUUCCCACUGGACUCCCCUGAGGCAGAUAUUUUGCAAAAGAAAACUUCCCGCCAUGAGAUCUUUUCCCACAUUCCCUCUUGGCAACUUAACCAGAAGAUAAGGUUAAGUUCAUUUCCACGGCCUUUAGAACCUCUGGACCUUAUACAUGAGAAAAGACAUCAUUCAUGGUUGGAGUCACUGGACCUGGUUAAUAUGUACCAAAAGGAAACAGAAAAAGCAGUUCUGGUGGCUACAUCUUGCAAGUACUAGACCAGAAUAUAAAGCUGGAUGAGAGAGACUUUGAUGAUAUGAAGUACUAGGGUUUAAAGGGAACACCGAACUCAGUGGAUUGCAAGAGCAUCUGACAUCAGCCCUACUGUGCUUUAGGCAUGGCUCUUGGAAAUAUGACAGACCACAGUACAUAGUGUGAAGUUUCUAGACCUGCCCUGAUACAGUGUUGUGGAACCAAUAUAAAGACUGAGUCACUGGACAAGCUAGAGUGACUGUGUACUUCAGGAUUAACAAAAACAUUAGUUUCACUAAGUUUAUAAAGAUUGAAAUUUUUACAGGCUUAACAGUGGCUGUUGUCUAUAGGCCAAGAAGGAUUAGCAAGUAAUGCUCUUAUGAAACAAAUGUUGAAGAUGAUAUACAAUUCUAGAAGAGCAAAGGAAAGGUGGUAGCAUGUAAUCAGUACAGAGAGAUAAGGACCAACAUAAUUUCCAUGCCAGUUAUCAGCAACUCAACAGCUGAGGAACUCUAUUAUGUAGGAAUCUAAGAUCAUGGAUGAGCUAUCAUCACAGUUUUUAGGGGAACUAUAGAAAGGCUUCCAAUAAGGAUUUUUGUACAUGUACAUAUAUAUUCAGAAAGCAGCUAAUGUGGAGAAGCAGAAGGUCGAUGUCAGCCACUCCAGUGGAAAUUUCAAUCACUCAUCUACUUUCCAAGCUUGAGCCAACUUUCAGACUGAGAGUCCAAUAAUUAAAGCAGAAGCUCUGUUUUUCUGAGAAAUGACCUGAUGGCAGAGCAAAUAUAUACUGUAAAGAUAAUUCUCUUCCUCUACUCAAAGUGUCUGUAGCCGCAGGUACAUAUGGAAAAGGGAGCACCCACAUUUUUUGAUAUAGUGUGUGAAUUGAAGGAAAGUCAACUUUUACCAUAGCCUCCCUUCAAGAGUGGGUACAUAUGAAAAUCAGGUAAUAAAUUUAGUUUAACCACGAAUUCAUUUCACAAUGGGUCCAAUGAGUCCAUAUAUGCACAAUAAAACUUUAUUUCCUGAAUUCAUAAUUUAGAUAUACAUACAUAGUAACUGGCAGAACACUCACUCUAGUUCCUUGAAAUGUGAAUGAAUAAUAAUUGUCAUAGGAAAGGUCAAGGAAAAGACUGAAAAAUGUCUUUAUACCACAGCCAAGAGACUUCAUAAAGCAAUAUUGCCUUCCAGAUACAAUAGAAGAGAUCAGUGCCAUUUUUAAAAACCUAAAAAGUUGCAGAGGCAGUUUCUACUGUAUUCUCAUUUCAGUCACUUGUGUGGCCACACAAAAAUCAAAUACAUGAUGGCAGAUUGCAGUGAACUCUAGGACACAUACCCAAAUGGUAGACAUACAAAGCUGUUCUGACAAGUGUGAUAUUACUGGAAUGGGUAGACUUGGGUAUGUGAUACGUGUUAAUUCUUAUUUUUAGUUGCAGAAUUAUAAUUAGACACUUUUUUAUAAAUUUAAGAUUUUGGUUAAAAAUAAUAUAUUUGCUUAAACAUAAAACACAGUAUGUAUUUUUUUAUUGCUACAGGUGACGAUGUUUCUCCAGUUUAUAGUGAUCAAAUUUUGUUAUCCAUUGAGUUCUAGGAAAGUCUUGAAUUUUAAUGUUUUUAGACAGAAAGUUUCAAAGGCAUCUUUAUUGUCAAUAAGCUCUUCAGCUUGGAUAAAAGGUAAAAACUAAUAAAGGAUUCCAUUUACAUUUAAAAAAAAAAAAAAAAAAA

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Publications