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Populus trichocarpa miR396a stem-loop (ptc-MIR396a) secondary structure diagram

Populus trichocarpa miR396a stem-loop (ptc-MIR396a) URS00007B8C17_3694

Automated summary: This pre miRNA sequence is 123 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (miRBase, ENA). Described in 2 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (MIR396, RF00648). Populus trichocarpa miR396a stem-loop (ptc-MIR396a) sequence is a product of MIR396a precurso, MIR396a, ptc-MIR396a precursor, MIR396a precursor genes. Found in the black cottonwood reference genome.

Genome locations

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    Gene Ontology annotations

    Sequence

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    CUUGGUAUUCUUCCACAGCUUUCUUGAACUGCACCUAUUUGAAUAUUGUUGUUGAUGUUGCCGUGCAUGUACAUAUGACAUUGUAUUUUUGUUGCGGUUCAAUAAAGCUGUGGGAAGAUACAA

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    2D structure New