Automated summary: This pre miRNA sequence is 103 nucleotides long and is found in Populus trichocarpa. Annotated by 4 databases (ENA, Ensembl Plants, Rfam, miRBase). Matches 1 Rfam family (MIR1446, RF00954). Populus trichocarpa miR1446b stem-loop (ptc-MIR1446b) sequence is a product of ptc-MIR1446b precursor, MIR1446b precursor, MIR1446b, MIR1446b precurso, ENSRNA049997718 genes. Found in the Populus trichocarpa reference genome.
This sequence is found in {{ locations.length }} genome
| Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
|---|---|---|---|---|---|---|---|---|
| Loading genome locations... | ||||||||
| Failed to load data from server | ||||||||
| No genome locations known | ||||||||
|
loading browser
|
{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
CCAAUUUCUUCUGAACUCUCUCCCUCAACCGCCACUCUAGAGGUUGGCACCUUGUCAAUUGUUUCUGUGUAGCGGUCGAGGUGAGGGGUUCAGAACAUGUUGG
View annotations in different species by clicking on species names.
Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.