Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.
Populus trichocarpa miR482b stem-loop (ptc-MIR482b) secondary structure diagram

Populus trichocarpa miR482b stem-loop (ptc-MIR482b) URS00007A7829_3694

Automated summary: This pre miRNA sequence is 150 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Described in 3 papers. Has a conserved secondary structure or a structured region. Populus trichocarpa miR482b stem-loop (ptc-MIR482b) sequence is a product of MIR482b, MIR482b precursor, ptc-MIR482b precursor, MIR482b precurso genes. Found in the black cottonwood reference genome.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    GAGAAGAGCCGGAGGGGGAGACUGAGACCUACUGGAAGUUGUGGGCAUGAGGUGUUUGGCAAGAAAAUGGAUCUUUUCCUUAUGAUGAUUUCUUACCAAUACCUCUCAUGCCAAUGAUUUCCAGCAGUUCCUCCCUUUCCCUUCUUUCUC

    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.

    2D structure New