Automated summary: This pre miRNA sequence is 97 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Matches 1 Rfam family (MIR398, RF00695). Populus trichocarpa miR398c stem-loop (ptc-MIR398c) sequence is a product of MIR398c precurso, MIR398c precursor, MIR398c, ptc-MIR398c precursor genes. Found in the Populus trichocarpa reference genome.
This sequence is found in {{ locations.length }} genome
Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
---|---|---|---|---|---|---|---|---|
Loading genome locations... | ||||||||
Failed to load data from server | ||||||||
No genome locations known | ||||||||
loading browser
|
{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
AGGAUUCCUACAGGAGCGACCUGAAAUCACAUGUGGGCUGCACCCUCCUGGGUUAUCUUGAGCAACAUGUGUUCUCAGGUCGCCCCUGCCGGGCUUU
View annotations in different species by clicking on species names.
Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.