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Arabidopsis lyrata miR824 stem-loop (aly-MIR824) secondary structure diagram

Arabidopsis lyrata miR824 stem-loop (aly-MIR824) URS0000799641_59689

Automated summary: This pre miRNA sequence is 654 nucleotides long and is found in Arabidopsis lyrata. Annotated by 2 databases (miRBase, ENA). Described in 3 papers. Has a conserved secondary structure or a structured region. Matches 1 Rfam family (MIR824, RF00943). Arabidopsis lyrata miR824 stem-loop (aly-MIR824) sequence is a product of aly-MIR824 precursor, MIR824 precurso, MIR824 precursor, MIR824 genes. Found in the Arabidopsis lyrata reference genome.

Genome locations

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    Gene Ontology annotations

    Sequence

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    AGUUGUCUCUCAUGUCUAGACCAUUUGUGAGAAGGGAGUUUUUGUUUGCACCAAUACCCACCAAUCUCUAAGUUUGUAAGAAGUAUUAUGCUCAAUUAAGGAAAAUAGCUAGUUCAACUUACCACACUACCCUUUUACAAACUAUCCUAUAUGUUAGAUGCUAGCAUGGCGUAAUUUUGUGUUCUCAUUCUGCAGCAGGGUUAGUUUCUUGUGUACCUCUAGAUAUUUAUUCUCUUGCUGCGUAGGGUUCCCAAGCUGCCAAAAACUUUUCAAAAUUAGAGAUCUGUUCCCCACUAACCCCCAUCCAAUAAGGAAGGUCUACCUGUAUGUAGCUCACAGCUAUUAAAGCUGUGCUCGCGUCUUGGUUUUACUGUUUUAGUUACCCCAUGAAAUCUGAUCCUUCAGAAGUUAGGUAUAGAAGUAAGUCGAUUAAGUUCAUUCAUGACUUUUCCAGAUGUUGCACAGAUAACUUUUUUAUUUGUAUUAUAACUAGUCCAAGCCGAUUCUCGAAAUCAUAUAAAAUCAUUUACACCUUGGUCAUGGUAGCCAAGAAUUUGUAUCUUACACUAGGUUUCCUAAUAAAUAAAAAUGGGGAGUGGGGAGGUGUUUGGUUAUAUUCCCUUCUCAUCGAUGGUCUAGAUGUGCGAGGUGACU

    Taxonomic tree

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    2D structure New