Automated summary: This pre miRNA sequence is 105 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Has a conserved secondary structure or a structured region. Matches 1 Rfam family (mir-166, RF00075). Populus trichocarpa miR166d stem-loop (ptc-MIR166d) sequence is a product of MIR166d, MIR166d precurso, ptc-MIR166d precursor, MIR166d precursor genes. Found in the Populus trichocarpa reference genome.
This sequence is found in {{ locations.length }} genome
| Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
|---|---|---|---|---|---|---|---|---|
| Loading genome locations... | ||||||||
| Failed to load data from server | ||||||||
| No genome locations known | ||||||||
|
loading browser
|
{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
CGUGAGUUGAGGGGAAUGUUGGCUGGCUCGAAGCUUAAGCAAAGAGUUUUCUCUCAAGAAACAACUGUUAAGGCUUCGGACCAGGCUUCAUUCCCCUCAACCAAU
View annotations in different species by clicking on species names.
Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.