Sorry, there was a problem loading sequence from server. Please try again and contact us if the problem persists.

Populus trichocarpa miR164e stem-loop (ptc-MIR164e) URS000078E58D_3694

Automated summary: This pre miRNA sequence is 155 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Matches 1 Rfam family (MIR164, RF00647). Populus trichocarpa miR164e stem-loop (ptc-MIR164e) sequence is a product of ptc-MIR164e precursor, MIR164e, MIR164e precursor, MIR164e precurso genes. Found in the Populus trichocarpa reference genome.

Genome locations

Sorry, there was a problem loading genome locations from server. Please try again and contact us if the problem persists.

This sequence is found in {{ locations.length }} genome :

Go to location Chromosome Start End Strand Ensembl UCSC Sequence identity
Loading genome locations...
Failed to load data from server
No genome locations known
loading browser
  • Can't view - strange chromosome name
  • {{ location.chromosome }} {{ location.start | number }} {{ location.end | number }} {{ location.strand == "1" ? "forward" : "reverse" }} {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} UCSC 100% {{ location.identity * 100 | number:0 }}%

    No genome locations found for this sequence. Learn more →

    Gene Ontology annotations

    Sequence

    Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset

    Search for similar sequences
    GUGAGCAAGAUGGAGAAGCAGGGCACGUGCAUUACUAACUCAUGCACACAGAGUGAGAGAGACAUUUCUUGCUGGAGUUAUGACUCUUACCUACUAUAGAUUGUGUUGGCUUCAGCGAGUUAGUUCUUCAUGUGCCUGUCUUCCCCAUCAUGAUC

    Taxonomic tree

    View annotations in different species by clicking on species names.

    Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.