Automated summary: This pre miRNA sequence is 155 nucleotides long and is found in Populus trichocarpa. Annotated by 2 databases (ENA, miRBase). Matches 1 Rfam family (MIR164, RF00647). Populus trichocarpa miR164e stem-loop (ptc-MIR164e) sequence is a product of ptc-MIR164e precursor, MIR164e, MIR164e precursor, MIR164e precurso genes. Found in the Populus trichocarpa reference genome.
This sequence is found in {{ locations.length }} genome
Go to location | Chromosome | Start | End | Strand | Ensembl | UCSC | Sequence identity | |
---|---|---|---|---|---|---|---|---|
Loading genome locations... | ||||||||
Failed to load data from server | ||||||||
No genome locations known | ||||||||
loading browser
|
{{ location.chromosome }} | {{ location.start | number }} | {{ location.end | number }} | {{ location.strand == "1" ? "forward" : "reverse" }} | {{ location.ensembl_division.name.replace('EnsemblVertebrates', 'Ensembl') }} | UCSC | 100% | {{ location.identity * 100 | number:0 }}% |
No genome locations found for this sequence. Learn more →
Sequence features are shown above as colored rectangles. Zoom in and click to view details, or Reset
GUGAGCAAGAUGGAGAAGCAGGGCACGUGCAUUACUAACUCAUGCACACAGAGUGAGAGAGACAUUUCUUGCUGGAGUUAUGACUCUUACCUACUAUAGAUUGUGUUGGCUUCAGCGAGUUAGUUCUUCAUGUGCCUGUCUUCCCCAUCAUGAUC
View annotations in different species by clicking on species names.
Scroll around to explore the entire tree. Click tree nodes to collapse or expand them. Hover over taxon names to display additional information.