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Homo sapiens (human) long intergenic non-protein coding RNA 208 (LINC00208) URS000075E981_9606

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LINC00208: LINC00208, also known as C8orf14, is a long non-coding RNA (lncRNA) that has been found to have a high linkage disequilibrium (LD) with inversion status in different European populations [PMC4278715]. It is located distal to the BLK locus and has been associated with significant deletion on segment 8p23.2 [PMC8810060]. Two variants in high LD with the inversion have been identified in the promoter region and first intron of LINC00208, and these variants have been linked to O2 protection against Barrett's esophagus [PMC9189494]. LINC00208 is also correlated with four protein-coding genes (PCGs) in the yellow module, suggesting potential functional relationships [PMC8817105]. Additionally, loci mapped within or near LINC00208 have been identified near genes such as CFTR, M5RA, BLK, KHDRBS2, TPPP, CEP72, TMOD1, SATB2, HTR3C and ABCG5 [PMC5622402]. References: - [PMC4278715]: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4278715/ - [PMC8810060]: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8810060/ - [PMC9189494]: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9189494/ - [PMC8817105]: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8817105/ - [PMC5622402]: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5622402/

Genome locations

Gene Ontology annotations

Sequence

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GGAGUUUCUCUGGCACACUCUUUGAGGAAAUAGAAUUCGCCAAACCAAUGCAAAUGGAGAAAUAUAUUUCACCUGAGUAGGGAAGAAAAACCUUGUAAAGGCUUCCAAGAACCUCCAGAAACCUACUGGAUGAGCUUACCACUAAUCUCUUUUAAAGCAAUUCCCUGACAACACUCUGUUAAUCUCUCCUGAGCUCCUUAGUACCCCCUGAAAGUAGCAGGACAGCCUUACUUUCCAAAUCUUCACCUUUGCAAGAGUCUAGUCUGUGAGUCCAGGCUCACCUGAAGUCUGAGAUUUUGGGAGCUUUGGAGAAUUCUGGAUAAAAUCCCUUACUGGACUUAGCAGGAAUCUCCGAUCUGUGGAGAAGUCUCCUCAGAGACUGAGCAUCUGUUCCUAGCUCCCUCCGGGCUCUGAUGCCAUUAAUGACUGCAGGAAGCUGUUCCAGGCCUCAAUACAGAAAGAACCCUUAGACCCUCAGAGCUGGAGGUGUGCAGACUGGUCUCUGCCUGGGCUCAACCUCUGUGAUUUCUGGCAAGUUACUGAAAUUCUCUGUGCCUCAGGUUUCUUUUAUGAAAAUUAUAACAGUUUUAUCUCCUAGGGUUAUGGUGAAUACCUAGGGCAGGACCGGGCACUUAGAAAGCUCUCAUCCAAUGUCCCCUAACUCUUGGAGACAAUAAUCAAGACUUAGAGGAACUGACUGGGGGAAACGUCAACACUUUCUUGGUUCUCUCAGAGGCCGGUGGAGACGCUGCUCCAUUCUGCCUGGAUCAUUUCCCAGGGCAGUAUGAGACAGGCCUUCAUCAGAAAGGCCGGGCCUGUGGAUGGAGGCAGGGGGCUGAUGGAAAUGACCUCUGUGCAGCUAAGGAUGCUAUGCUUUGUUUCUUGAGCUGAACUGCAAUUGUGCCCAGCCUUCCUGGGACAAGGGUGGGAACUCAGGAGUUACUACAACCACCGCCACCCCACCCUGGGAAGGCCAUUUGUGGUCUUGGACAAGUUCCCUCCCACGUGGCUGGACGAGCCCUCAGGCGACAGCUGCGUUCUGUCGAGGAAGCCACGCGUAGGUAGGUGAUUCCCCUACUUAAUCUGGAUCAGACUCACCCUGGACUAAUGCCCAUGCUCCUGCCUCCAGGCCCAUAGAAGGAGGAGGCAACCCAUCUGGAUGUGUGGAGGAGGUUUUGAUCUCCUCUUCUUGGUCAGAACUGCUCAUAAGAAUCUCCACUGCAGGAUCGAUAUUUGCUGCCAUUUCUUUUCCUCUGCACACACAUUCUAGAGUAAGCAGCAAACAGAGGUGACCAGAGAUGCUAGGAUGGCAACAUGAGGGGUCUGGAAAGUCUCCCACUGAGCGAUCAGAAGCUGGGUUUCACAUACUCACCACGGCUAGUCUAGCGAGUUUGCAGAAUUCAGAAACGGGAUGAGACCCUGAGGUUUGCCUUUCAUUAGCCUGGCUGUCCACUUAUGGGACAGUCUCUGCAGGAAGGAAGGAAACAGGGGAGGCUCCUACCUGCCCCAUCAGCUCACUUUUUAAAACAUGCUCACCUGGCCUCACCAAGUGAGGUGGGAGGAGAGCCCGAGAUCGGUUCACUUUGUGCUUCACAUGUCCUUCACAUGUCACCUCUCUACUCCGUGAACUUGCAAGUCUCACCUGGGUCUCUCACUUUCCAUUCCCUGUCUCUCAGAUCUACUAGCACAAGGCUACAGCCACAAAGCACUUAUAUAGUUGGGCCCCUUUGCUGACACGUGACAUGCAAUUCAGGGAUGCCUCCUCCUCCCCCUAGAAGUGAUGAGUGCCUGCAGCUAUUGUAAAUGUUAAAGUAAAAUUAAUGUUGGUUGUACACCCAUGUUCAUAGCAGCAUGACUCACAAUAGCCAAAUGUAGAAGCAAUCUGUAUUAGUCCGUUCUCAAGCUGCUAAUAAAGACAUAUCUGAGA

Taxonomic tree

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Publications